LOCUS VTR95819.1 256 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Xylose isomerase domain protein TIM
barrel OS=Melioribacter roseus (strain JCM 17771 / P3M-
2) GN=MROS_2632 PE=4 SV=1: AP_endonuc_2 protein.
ACCESSION LR593886-5120
PROTEIN_ID VTR95819.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_18950"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|I6YZ61|I6YZ61_MELRP ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Melioribacter roseus (strain
JCM 17771 / P3M-2) GN=MROS_2632 PE=4 SV=1 ; EVALUE=2e-50 ;
Q/S_length_ratio=0.889"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A059X2L4|A0A059X2L4_9BACT ;
ALN/Q_length_ratio=0.941 ; DESCRIPTION=Xylose
isomerase-like TIM barrel OS=uncultured bacterium PE=4
SV=1 ; EVALUE=1e-31 ; Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|C7Q831|C7Q831_CATAD ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Catenulispora acidiphila
(strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM
14897) GN=Caci_5339 PE=4 SV=1 ; EVALUE=1e-29 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|U1YAH9|U1YAH9_9MICC ;
ALN/Q_length_ratio=0.930 ; DESCRIPTION=Uncharacterized
protein OS=Arthrobacter sp. AK-YN10 GN=M707_06430 PE=4
SV=1 ; EVALUE=1e-25 ; Q/S_length_ratio=1.041"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A089I1N9|A0A089I1N9_9BACL ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Xylose isomerase
OS=Paenibacillus sp. FSL H7-0357 GN=H70357_16915 PE=4 SV=1
; EVALUE=2e-25 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|S3ZHJ2|S3ZHJ2_9ACTO ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Uncharacterized
protein OS=Streptomyces aurantiacus JA 4570 GN=STRAU_4352
PE=4 SV=1 ; EVALUE=2e-25 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|R9GVC1|R9GVC1_9SPHI ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Arcticibacter svalbardensis
MN12-7 GN=ADIARSV_1105 PE=4 SV=1 ; EVALUE=4e-25 ;
Q/S_length_ratio=0.952"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|U5CNP6|U5CNP6_THEYO ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Sugar phosphate
isomerase OS=Caldanaerobacter subterraneus subsp.
yonseiensis KB-1 GN=O163_10825 PE=4 SV=1 ; EVALUE=5e-24 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A068NS13|A0A068NS13_9BACT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Fimbriimonas ginsengisoli
Gsoil 348 GN=OP10G_2749 PE=4 SV=1 ; EVALUE=6e-24 ;
Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F5LSE9|F5LSE9_9BACL ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=AP endonuclease,
family 2 OS=Paenibacillus sp. HGF7 GN=HMPREF9413_3749 PE=4
SV=1 ; EVALUE=1e-22 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|H8KQ08|H8KQ08_SOLCM ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=Sugar phosphate
isomerase/epimerase OS=Solitalea canadensis (strain ATCC
29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D)
GN=Solca_1009 PE=4 SV=1 ; EVALUE=1e-22 ;
Q/S_length_ratio=0.883"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|S3APG7|S3APG7_9BACL ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Uncharacterized
protein OS=Paenibacillus sp. HGH0039 GN=HMPREF1207_01916
PE=4 SV=1 ; EVALUE=1e-22 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A7NGE0|A7NGE0_ROSCS ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Roseiflexus castenholzii
(strain DSM 13941 / HLO8) GN=Rcas_0395 PE=4 SV=1 ;
EVALUE=2e-22 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B0K7A8|B0K7A8_THEP3 ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=Teth39_0591
PE=4 SV=1 ; EVALUE=3e-22 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|E8UW53|E8UW53_THEBF ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Thermoanaerobacter
brockii subsp. finnii (strain ATCC 43586 / DSM 3389 /
AKO-1) GN=Thebr_0608 PE=4 SV=1 ; EVALUE=3e-22 ;
Q/S_length_ratio=1.028"
/note="Pfam_scan:hit_1 (32..214);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:212; HMM_Length:213;
EVALUE:4.5e-21; BITSCORE: 75.1"
BEGIN
1 MGRQTGRGHS TPIALQLWTI RDAIASDVDQ ALSRVRVAGF QAVELAPLPP GLSPERLAKA
61 LARHELTVVS IHGDLPTPAN IEHWARITQM CRCRKIIWHG WPRDSRYDSA VGLRDLIASC
121 NAAGNLAREH GLEFGLHNHW WEFELLEGVL SIRTLHEELH LDIFWQLDVY WARTAGFDPA
181 GAVSELGSRL GSIHWKDGPA VYGQPMTALG HGTIDVPRIL NALTHPVDWV IELDECASDP
241 LEAARQSLEY LEARTS
//