LOCUS VTR95728.1 368 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana trna-u20-dihydrouridine synthase :
tRNA-dihydrouridine synthase OS=Isosphaera pallida (strain
ATCC 43644 / DSM 9630 / IS1B) GN=Isop_1782 PE=3 SV=1:
Dus protein.
ACCESSION LR593886-5029
PROTEIN_ID VTR95728.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_19860"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8R1E8|E8R1E8_ISOPI ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_1782 PE=3 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.936"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6CBK4|A6CBK4_9PLAN ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_00247
PE=3 SV=1 ; EVALUE=1e-126 ; Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SNL2|D5SNL2_PLAL2 ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_2300 PE=3 SV=1 ;
EVALUE=1e-118 ; Q/S_length_ratio=1.048"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F0SFY4|F0SFY4_PLABD ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Planctomyces brasiliensis (strain ATCC 49424 /
DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_0646 PE=3 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DNF0|L0DNF0_SINAD ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6269
PE=3 SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=1.028"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B5JQF7|B5JQF7_9BACT ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Verrucomicrobiae bacterium DG1235
GN=VDG1235_415 PE=3 SV=1 ; EVALUE=1e-109 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F0SQN6|F0SQN6_PLABD ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Planctomyces brasiliensis (strain ATCC 49424 /
DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_1454 PE=3 SV=1 ; EVALUE=1e-103 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A6BZR9|A6BZR9_9PLAN ;
ALN/Q_length_ratio=0.935 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Planctomyces maris DSM 8797 GN=PM8797T_21823
PE=3 SV=1 ; EVALUE=1e-100 ; Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|B9XI73|B9XI73_PEDPL ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Pedosphaera parvula (strain Ellin514)
GN=Cflav_PD3536 PE=3 SV=1 ; EVALUE=1e-99 ;
Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|I6AXP2|I6AXP2_9BACT ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Opitutaceae bacterium TAV1 GN=OpiT1DRAFT_04313
PE=3 SV=1 ; EVALUE=1e-97 ; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D5SNC4|D5SNC4_PLAL2 ;
ALN/Q_length_ratio=0.924 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_0199 PE=3 SV=1 ;
EVALUE=3e-96 ; Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B1ZWU6|B1ZWU6_OPITP ;
ALN/Q_length_ratio=0.864 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Opitutus terrae (strain DSM 11246 / PB90-1)
GN=Oter_0935 PE=3 SV=1 ; EVALUE=1e-95 ;
Q/S_length_ratio=0.995"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F7NMS3|F7NMS3_9FIRM ;
ALN/Q_length_ratio=0.845 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Acetonema longum DSM 6540 GN=ALO_17021 PE=3
SV=1 ; EVALUE=3e-76 ; Q/S_length_ratio=1.154"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I9LVD8|I9LVD8_9FIRM ;
ALN/Q_length_ratio=0.861 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Pelosinus fermentans A11 GN=FA11_3193 PE=3
SV=1 ; EVALUE=1e-74 ; Q/S_length_ratio=1.161"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I9LGY3|I9LGY3_9FIRM ;
ALN/Q_length_ratio=0.861 ; DESCRIPTION=tRNA-dihydrouridine
synthase OS=Pelosinus fermentans B4 GN=FB4_2648 PE=3 SV=1
; EVALUE=1e-74 ; Q/S_length_ratio=1.161"
/note="Pfam_scan:hit_1 (31..341); Pfam:PF01207.12:Dus;
Pfam_type:Family;HMM_aln_Length:292; HMM_Length:310;
EVALUE:2.8e-76; BITSCORE: 256.3"
/note="GO_domain:GO:0016491"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0006399"
BEGIN
1 MTNANAELPP PPAQYREPVS IGTIKLASRF NLAPLAGYTN LPFRLSVREL GGVGLCTTDL
61 VNARAIVDGI QKTMILLATD PAERPLFVQI FGSKAHEMAG AAKWLVERKL ADGIDINMGC
121 PVRKVVKTGG GSSMMCDTTG ATVDLVRQVV EAVPVPVSVK MRLGWDDDNL SAPYFAREFE
181 KVGVAALTIH GRTREQGFSG GVNHDGIRRV VEAVERIPVF GNGDVRSVWD AARMIADTGC
241 HGIAMGRGAL ANPWIFRQFD SWVRTGDPGP RGTYAERLAF MRLHLRRLVD WKGSEKNGCV
301 HFRKVATWYT KALRFPKRVQ QQLVMLSGLD EFEAIIAPFA SGSAPEGWTE YDSQQAHIAV
361 PAGPIAHW
//