LOCUS       VTR95692.1               188 aa    PRT              BCT 03-FEB-2020
DEFINITION  Gemmata massiliana sigma-70 family rna polymerase sigma
            factor : RNA polymerase sigma factor, sigma-70 family
            OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
            18658 / VKM B-2454 / MOB10) GN=Sinac_0873 PE=4 SV=1: Sigma70_ECF
            protein.
ACCESSION   LR593886-4993
PROTEIN_ID  VTR95692.1
SOURCE      Gemmata massiliana
  ORGANISM  Gemmata massiliana
            Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
            Gemmata.
REFERENCE   1
  AUTHORS   
  CONSRTM   Science for Life Laboratories
  JOURNAL   Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
            MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
            Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES             Qualifiers
     source          /organism="Gemmata massiliana"
                     /chromosome="1"
                     /isolate="Soil9"
                     /mol_type="genomic DNA"
                     /isolation_source="soil"
                     /db_xref="taxon:1210884"
     protein         /locus_tag="SOIL9_20220"
                     /note="BLAST_uniprot:hit_1 ;
                     ACCESSION=tr|L0D8T7|L0D8T7_SINAD ;
                     ALN/Q_length_ratio=0.947 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0873 PE=4 SV=1 ; EVALUE=9e-25 ;
                     Q/S_length_ratio=0.926"
                     /note="BLAST_uniprot:hit_2 ;
                     ACCESSION=tr|E8R0Z6|E8R0Z6_ISOPI ;
                     ALN/Q_length_ratio=0.952 ; DESCRIPTION=RNA polymerase,
                     sigma-24 subunit, ECF subfamily OS=Isosphaera pallida
                     (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2781 PE=4
                     SV=1 ; EVALUE=1e-24 ; Q/S_length_ratio=0.657"
                     /note="BLAST_uniprot:hit_3 ;
                     ACCESSION=tr|A0A090KMS8|A0A090KMS8_9BACT ;
                     ALN/Q_length_ratio=0.995 ; DESCRIPTION=Uncultured
                     bacterium genome assembly Metasoil_fosmids_resub
                     OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-20 ;
                     Q/S_length_ratio=0.931"
                     /note="BLAST_uniprot:hit_4 ;
                     ACCESSION=tr|L0DCU8|L0DCU8_SINAD ;
                     ALN/Q_length_ratio=0.867 ; DESCRIPTION=DNA-directed RNA
                     polymerase specialized sigma subunit, sigma24
                     OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
                     18658 / VKM B-2454 / MOB10) GN=Sinac_2383 PE=4 SV=1 ;
                     EVALUE=7e-18 ; Q/S_length_ratio=0.954"
                     /note="BLAST_uniprot:hit_5 ;
                     ACCESSION=tr|L0DQC7|L0DQC7_SINAD ;
                     ALN/Q_length_ratio=0.979 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_7020 PE=4 SV=1 ; EVALUE=1e-15 ;
                     Q/S_length_ratio=0.949"
                     /note="BLAST_uniprot:hit_6 ;
                     ACCESSION=tr|E8R6W5|E8R6W5_ISOPI ;
                     ALN/Q_length_ratio=0.910 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Isosphaera pallida
                     (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_3752 PE=4
                     SV=1 ; EVALUE=2e-06 ; Q/S_length_ratio=0.879"
                     /note="BLAST_uniprot:hit_7 ;
                     ACCESSION=tr|E8QXJ8|E8QXJ8_ISOPI ;
                     ALN/Q_length_ratio=0.505 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Isosphaera pallida
                     (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_2474 PE=4
                     SV=1 ; EVALUE=3e-06 ; Q/S_length_ratio=0.917"
                     /note="Pfam_scan:hit_1 (4..186);
                     Pfam:PF07638.6:Sigma70_ECF;
                     Pfam_type:Family;HMM_aln_Length:167; HMM_Length:185;
                     EVALUE:4.5e-08; BITSCORE: 32.9"
                     /note="GO_domain:GO:0003677"
                     /note="GO_domain:GO:0001071"
                     /note="GO_domain:GO:0000988"
                     /note="GO_domain:GO:0034641"
                     /note="GO_domain:GO:0009058"
                     /note="GO_domain:GO:0043234"
                     /note="GO_domain:GO:0005622"
BEGIN
        1 MENSAAFPEL LAGFRAGDSA SINALCERYA PFLRAAVRRQ LHPGLRTRFD SLDFVQDVWA
       61 SFLAIPAERY TFDTPEALLA FLNRMAHNRV VEVFRQRFGT QKDDITRERA VNSEDGSDQI
      121 RAPVPTASQL VIADEEWDRL RGRFPEGHRV VLELLRDGHS YEDIARLSGV SLSTVNRIVR
      181 RLKDFTDS
//