LOCUS VTR95672.1 243 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana ribonuclease ph : Ribonuclease PH OS=
Blastopirellula marina DSM 3645 GN=rph PE=3 SV=1: RNase_PH:
RNase_PH_C protein.
ACCESSION LR593886-4973
PROTEIN_ID VTR95672.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_20420"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A3ZRF4|A3ZRF4_9PLAN ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Ribonuclease PH
OS=Blastopirellula marina DSM 3645 GN=rph PE=3 SV=1 ;
EVALUE=2e-93 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R6P9|D2R6P9_PIRSD ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Ribonuclease PH
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=rph PE=3 SV=1 ; EVALUE=1e-92 ;
Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W9W096|W9W096_9GAMM ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Ribonuclease PH
OS=Thiorhodococcus sp. AK35 GN=rph PE=3 SV=1 ;
EVALUE=1e-89 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Y0KE83|Y0KE83_9PROT ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Ribonuclease PH
OS=Methylophilaceae bacterium 11 GN=rph PE=3 SV=1 ;
EVALUE=2e-89 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W3AFW2|W3AFW2_9BACL ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Ribonuclease PH
OS=Planomicrobium glaciei CHR43 GN=rph PE=3 SV=1 ;
EVALUE=6e-89 ; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|H6LGH4|H6LGH4_ACEWD ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Ribonuclease PH
OS=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 /
JCM 2381 / KCTC 1655) GN=rph PE=3 SV=1 ; EVALUE=1e-88 ;
Q/S_length_ratio=0.946"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q3SLI0|Q3SLI0_THIDA ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Ribonuclease PH
OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rph
PE=3 SV=1 ; EVALUE=4e-88 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A098EPE1|A0A098EPE1_9BACL ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Ribonuclease PH
OS=Planomicrobium sp. ES2 GN=rph PE=3 SV=1 ; EVALUE=1e-87
; Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F9ZDL2|F9ZDL2_9PROT ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Ribonuclease PH
OS=Nitrosomonas sp. AL212 GN=rph PE=3 SV=1 ; EVALUE=2e-87
; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|G2E1E7|G2E1E7_9GAMM ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Ribonuclease PH
OS=Thiorhodococcus drewsii AZ1 GN=rph PE=3 SV=1 ;
EVALUE=9e-87 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C6WYV9|C6WYV9_METML ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Ribonuclease PH
OS=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 /
DSM 17540) GN=rph PE=3 SV=1 ; EVALUE=9e-87 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S6A9M4|S6A9M4_9PROT ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Ribonuclease PH
OS=Sulfuricella denitrificans skB26 GN=rph PE=3 SV=1 ;
EVALUE=1e-86 ; Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A8MLK5|A8MLK5_ALKOO ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Ribonuclease PH
OS=Alkaliphilus oremlandii (strain OhILAs) GN=rph PE=3
SV=1 ; EVALUE=1e-86 ; Q/S_length_ratio=0.984"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|W0E837|W0E837_MARPU ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Ribonuclease PH
OS=Marichromatium purpuratum 984 GN=rph PE=3 SV=1 ;
EVALUE=2e-86 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F0SWL1|F0SWL1_SYNGF ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Ribonuclease PH
OS=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR)
GN=rph PE=3 SV=1 ; EVALUE=3e-86 ; Q/S_length_ratio=0.988"
/note="Pfam_scan:hit_1 (11..141);
Pfam:PF01138.16:RNase_PH;
Pfam_type:Domain;HMM_aln_Length:127; HMM_Length:132;
EVALUE:1.8e-21; BITSCORE: 76.8"
/note="Pfam_scan:hit_2 (158..225);
Pfam:PF03725.10:RNase_PH_C;
Pfam_type:Domain;HMM_aln_Length:65; HMM_Length:68;
EVALUE:3.5e-11; BITSCORE: 42.8"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0006399"
/note="Enzyme_Code:EC:3.1"
BEGIN
1 MPRPNERSPS ALRELTFLRG FTRPAPGSVL VKMGRTTVLC TCCVEPKVPD FLVGKGKGWL
61 TAEYGMLPGS TNTRKPRDKA GKVDGRSVEI QRLIGRSLRA VVDLDKLGER TLWIDCDVLE
121 ADGGTRTASI TGAFVAAVDA VNSIRALLTV PVSEVLTDSV AAVSVGLVDG EERLDLEYVE
181 DRDADVDMNL VMTGSGKIIE VQGSGEEATF SRKQLDALVD LGEAGIRTIT AEQKKVLGNT
241 WPF
//