LOCUS VTR95661.1 414 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana excinuclease abc subunit c : Excinuclease
ABC subunit C OS=Rhodopirellula maiorica SM1 GN=RMSM_06429
PE=4 SV=1: GIY-YIG: UVR protein.
ACCESSION LR593886-4962
PROTEIN_ID VTR95661.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_20530"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5RC67|M5RC67_9PLAN ;
ALN/Q_length_ratio=0.891 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Rhodopirellula maiorica SM1 GN=RMSM_06429
PE=4 SV=1 ; EVALUE=1e-80 ; Q/S_length_ratio=1.048"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5UES6|M5UES6_9PLAN ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Rhodopirellula sallentina SM41 GN=RSSM_04098
PE=4 SV=1 ; EVALUE=4e-79 ; Q/S_length_ratio=0.804"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M5SYJ2|M5SYJ2_9PLAN ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Rhodopirellula sp. SWK7 GN=RRSWK_05709 PE=4
SV=1 ; EVALUE=1e-73 ; Q/S_length_ratio=0.843"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M2A4C8|M2A4C8_9PLAN ;
ALN/Q_length_ratio=0.899 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Rhodopirellula europaea 6C GN=RE6C_04848 PE=4
SV=1 ; EVALUE=8e-70 ; Q/S_length_ratio=0.838"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q7UP29|Q7UP29_RHOBA ;
ALN/Q_length_ratio=0.899 ; DESCRIPTION=Exinuclease ABC
subunit C OS=Rhodopirellula baltica (strain SH1) GN=RB7201
PE=4 SV=1 ; EVALUE=1e-69 ; Q/S_length_ratio=0.838"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5SBX1|M5SBX1_9PLAN ;
ALN/Q_length_ratio=0.899 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Rhodopirellula europaea SH398 GN=RESH_00261
PE=4 SV=1 ; EVALUE=1e-69 ; Q/S_length_ratio=0.838"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5DHG1|K5DHG1_RHOBT ;
ALN/Q_length_ratio=0.899 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Rhodopirellula baltica SH28 GN=RBSH_02428
PE=4 SV=1 ; EVALUE=2e-69 ; Q/S_length_ratio=0.838"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7CMX0|L7CMX0_RHOBT ;
ALN/Q_length_ratio=0.899 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Rhodopirellula baltica SWK14 GN=RBSWK_00957
PE=4 SV=1 ; EVALUE=2e-69 ; Q/S_length_ratio=0.838"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F2ASP9|F2ASP9_RHOBT ;
ALN/Q_length_ratio=0.899 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Rhodopirellula baltica WH47 GN=RBWH47_05752
PE=4 SV=1 ; EVALUE=2e-69 ; Q/S_length_ratio=0.838"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|W0RLV2|W0RLV2_9BACT ;
ALN/Q_length_ratio=0.865 ; DESCRIPTION=UvrB/UvrC protein
OS=Gemmatimonadetes bacterium KBS708 GN=J421_3900 PE=4
SV=1 ; EVALUE=1e-65 ; Q/S_length_ratio=1.092"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A017T5B0|A0A017T5B0_9DELT ;
ALN/Q_length_ratio=0.843 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Chondromyces apiculatus DSM 436 GN=CAP_4860
PE=4 SV=1 ; EVALUE=4e-64 ; Q/S_length_ratio=1.040"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F8CIG0|F8CIG0_MYXFH ;
ALN/Q_length_ratio=0.812 ; DESCRIPTION=GIY-YIG catalytic
domain-containing protein OS=Myxococcus fulvus (strain
ATCC BAA-855 / HW-1) GN=LILAB_15615 PE=4 SV=1 ;
EVALUE=2e-53 ; Q/S_length_ratio=1.163"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q1CZB4|Q1CZB4_MYXXD ;
ALN/Q_length_ratio=0.819 ; DESCRIPTION=GIY-YIG catalytic
domain protein OS=Myxococcus xanthus (strain DK 1622)
GN=MXAN_6124 PE=4 SV=1 ; EVALUE=3e-53 ;
Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|U2SNP4|U2SNP4_9DELT ;
ALN/Q_length_ratio=0.819 ; DESCRIPTION=Excinuclease ABC
subunit C OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_05689 PE=4 SV=1 ; EVALUE=2e-50 ;
Q/S_length_ratio=1.166"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L7UKF5|L7UKF5_MYXSD ;
ALN/Q_length_ratio=0.819 ; DESCRIPTION=GIY-YIG catalytic
domain-containing protein OS=Myxococcus stipitatus (strain
DSM 14675 / JCM 12634 / Mx s8) GN=MYSTI_06739 PE=4 SV=1 ;
EVALUE=3e-48 ; Q/S_length_ratio=1.169"
/note="Pfam_scan:hit_1 (58..134); Pfam:PF01541.19:GIY-YIG;
Pfam_type:Domain;HMM_aln_Length:78; HMM_Length:80;
EVALUE:2e-09; BITSCORE: 37.6"
/note="Pfam_scan:hit_2 (256..289); Pfam:PF02151.14:UVR;
Pfam_type:Family;HMM_aln_Length:32; HMM_Length:36;
EVALUE:6.2e-08; BITSCORE: 31.9"
/note="GO_domain:GO:0003674"
BEGIN
1 MSRTPRDGRK QPRLFADDFD GFGPSRFRPI DEIVPVFEVR GKRLSRLKRG AKKNAPKAPG
61 VYGMLDKRDR LIYVGKAKNL RARLLCYFRE NSRDPKAGKI IEQTKRLVWE QCGDEFAALL
121 RELELIQRLR PRYNVLGVPG FQRHHYICVG RTPAPYVYVT SAPSGKELGT YGPLVKWGRS
181 DDAARRLNDW FKLRDCPQTV ALSFAEQGEL FDPDRGAKCL RFELGTCCGP CVGACSRKDY
241 SDGVRAVKAF LDGRNRSVLR TLQGQMEEAA AAFEFEKAMS LRDKLQALQW LDDRLSLLRT
301 ARDRNSFVYP LTGTDGRLRW YLIHRGEVQA VTAPPTPESA ESVSALLATT FADHPVPAVL
361 SDVAVDSVLL VSAWFRKYTD ERATLLPRAK AEEVCASHVQ AREALAPLSV REHE
//