LOCUS VTR95626.1 308 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana radical sam domain-containing protein
: Uncharacterized protein OS=Planctomyces maris DSM 8797
GN=PM8797T_28484 PE=4 SV=1: Radical_SAM protein.
ACCESSION LR593886-4927
PROTEIN_ID VTR95626.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_20880"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A6BZ48|A6BZ48_9PLAN ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_28484
PE=4 SV=1 ; EVALUE=1e-116 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M5RZ37|M5RZ37_9PLAN ;
ALN/Q_length_ratio=0.912 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula maiorica SM1
GN=RMSM_02411 PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=1.048"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|S0ET78|S0ET78_CHTCT ;
ALN/Q_length_ratio=0.961 ; DESCRIPTION=Predicted Fe-S
oxidoreductase OS=Chthonomonas calidirosea (strain DSM
23976 / ICMP 18418 / T49) GN=CCALI_00822 PE=4 SV=1 ;
EVALUE=1e-98 ; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5U680|M5U680_9PLAN ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula sallentina
SM41 GN=RSSM_05216 PE=4 SV=1 ; EVALUE=2e-98 ;
Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5TD19|M5TD19_9PLAN ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula sp. SWK7
GN=RRSWK_00671 PE=4 SV=1 ; EVALUE=6e-95 ;
Q/S_length_ratio=0.951"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B1ZY92|B1ZY92_OPITP ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Radical SAM domain
protein OS=Opitutus terrae (strain DSM 11246 / PB90-1)
GN=Oter_2957 PE=4 SV=1 ; EVALUE=2e-80 ;
Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G2SIV1|G2SIV1_RHOMR ;
ALN/Q_length_ratio=0.909 ; DESCRIPTION=Radical SAM domain
protein OS=Rhodothermus marinus SG0.5JP17-172
GN=Rhom172_0795 PE=4 SV=1 ; EVALUE=4e-69 ;
Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D0MD40|D0MD40_RHOM4 ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=Radical SAM domain
protein OS=Rhodothermus marinus (strain ATCC 43812 / DSM
4252 / R-10) GN=Rmar_2071 PE=4 SV=1 ; EVALUE=3e-67 ;
Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W0RLA6|W0RLA6_9BACT ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Gemmatimonadetes bacterium
KBS708 GN=J421_4024 PE=4 SV=1 ; EVALUE=3e-58 ;
Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F2B0Q3|F2B0Q3_RHOBT ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Radical SAM domain
protein OS=Rhodopirellula baltica WH47 GN=RBWH47_05340
PE=4 SV=1 ; EVALUE=6e-48 ; Q/S_length_ratio=0.917"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|L7CIS6|L7CIS6_RHOBT ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_01895
PE=4 SV=1 ; EVALUE=1e-47 ; Q/S_length_ratio=0.917"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K5D5V5|K5D5V5_RHOBT ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula baltica SH28
GN=RBSH_02645 PE=4 SV=1 ; EVALUE=4e-47 ;
Q/S_length_ratio=0.917"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M2BAF8|M2BAF8_9PLAN ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula europaea 6C
GN=RE6C_00232 PE=4 SV=1 ; EVALUE=3e-46 ;
Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5S723|M5S723_9PLAN ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Rhodopirellula europaea SH398
GN=RESH_01845 PE=4 SV=1 ; EVALUE=7e-46 ;
Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q7UX01|Q7UX01_RHOBA ;
ALN/Q_length_ratio=0.890 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB1651 PE=4 SV=1 ; EVALUE=1e-45 ;
Q/S_length_ratio=0.917"
/note="Pfam_scan:hit_1 (49..216);
Pfam:PF04055.16:Radical_SAM;
Pfam_type:Domain;HMM_aln_Length:149; HMM_Length:166;
EVALUE:1.4e-09; BITSCORE: 38.3"
/note="GO_domain:GO:0003674"
BEGIN
1 MTPVPLFTDD WVLARRPARN SLAADRPYAW LVEPEPAADG RLVDVATLFL TNRECPFRCV
61 MCDLWKNTLP ESVGVGQIPE QIRWALAQLP PSQHLKLYNA GSFFDPRAIP PEDYPEIVRL
121 AAPFERVIVE CHPKTIGTRC ESFHAMLTKQ GVKLEVALGL ETVHPEVLLR LNKRMTTDDF
181 AQAAHALRAA GIAVRAFIMV RPPFLTEDEG LEWAKRSIDF AFAHGVECCS LIPTRDGNGA
241 MEELARAGHF APPALETLER ALEYGLALRA GRVFLDLWDI AKVSPGAPDR AARVARLARM
301 NLSQHLEP
//