LOCUS VTR95492.1 122 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Sigma-70 region 4 type 2 OS=Ktedonobacter
racemifer DSM 44963 GN=Krac_9148 PE=4 SV=1: HTH_33 protein.
ACCESSION LR593886-4793
PROTEIN_ID VTR95492.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_22220"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D6TR98|D6TR98_9CHLR ;
ALN/Q_length_ratio=0.861 ; DESCRIPTION=Sigma-70 region 4
type 2 OS=Ktedonobacter racemifer DSM 44963 GN=Krac_9148
PE=4 SV=1 ; EVALUE=2e-12 ; Q/S_length_ratio=0.409"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M6XX62|M6XX62_9LEPT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=Homeodomain-like
domain protein OS=Leptospira santarosai str. AIM
GN=LEP1GSC070_1107 PE=4 SV=1 ; EVALUE=3e-11 ;
Q/S_length_ratio=0.777"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|T0YLN3|T0YLN3_9ZZZZ ;
ALN/Q_length_ratio=0.779 ; DESCRIPTION=Transposase ISLbp6
OS=mine drainage metagenome GN=B2A_12184 PE=4 SV=1 ;
EVALUE=3e-11 ; Q/S_length_ratio=0.731"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|M6Y508|M6Y508_9LEPT ;
ALN/Q_length_ratio=0.795 ; DESCRIPTION=Homeodomain-like
domain protein OS=Leptospira santarosai str. AIM
GN=LEP1GSC070_0444 PE=4 SV=1 ; EVALUE=3e-11 ;
Q/S_length_ratio=0.363"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|X1V1S7|X1V1S7_9ZZZZ ;
ALN/Q_length_ratio=0.598 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S12H4_S01366 OS=marine sediment
metagenome GN=S12H4_27586 PE=4 SV=1 ; EVALUE=4e-11 ;
Q/S_length_ratio=0.767"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|T1CTN7|T1CTN7_9ZZZZ ;
ALN/Q_length_ratio=0.787 ; DESCRIPTION=ISXoo2 transposase
(Fragment) OS=mine drainage metagenome GN=B1B_03519 PE=4
SV=1 ; EVALUE=5e-11 ; Q/S_length_ratio=1.184"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|T1BH56|T1BH56_9ZZZZ ;
ALN/Q_length_ratio=0.787 ; DESCRIPTION=ISXoo2 transposase
OS=mine drainage metagenome GN=B2A_06517 PE=4 SV=1 ;
EVALUE=7e-11 ; Q/S_length_ratio=0.938"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M6YIU8|M6YIU8_9LEPT ;
ALN/Q_length_ratio=0.803 ; DESCRIPTION=Homeodomain-like
domain protein OS=Leptospira santarosai str. AIM
GN=LEP1GSC070_0447 PE=4 SV=1 ; EVALUE=1e-10 ;
Q/S_length_ratio=0.362"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K8MH40|K8MH40_9LEPT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=Homeodomain-like
domain protein OS=Leptospira santarosai str. JET
GN=LEP1GSC071_3363 PE=4 SV=1 ; EVALUE=1e-10 ;
Q/S_length_ratio=0.480"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A097ET49|A0A097ET49_9LEPT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=Transposase ISLbp6
OS=Leptospira santarosai serovar Shermani str. LT 821
GN=LSS_23245 PE=4 SV=1 ; EVALUE=2e-10 ;
Q/S_length_ratio=0.422"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M6H4K9|M6H4K9_9LEPT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=Homeodomain-like
domain protein OS=Leptospira santarosai str. 2000027870
GN=LEP1GSC039_2027 PE=4 SV=1 ; EVALUE=2e-10 ;
Q/S_length_ratio=0.422"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|S3W9F6|S3W9F6_9LEPT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=Homeodomain-like
domain protein OS=Leptospira santarosai serovar Shermani
str. 1342KT GN=LEP1GSC048_1429 PE=4 SV=1 ; EVALUE=2e-10 ;
Q/S_length_ratio=0.422"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M6Z7C2|M6Z7C2_9LEPT ;
ALN/Q_length_ratio=0.754 ; DESCRIPTION=DDE family
endonuclease OS=Leptospira santarosai str. HAI1380
GN=LEP1GSC171_3034 PE=4 SV=1 ; EVALUE=3e-10 ;
Q/S_length_ratio=0.488"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M6XZF4|M6XZF4_9LEPT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=Homeodomain-like
domain protein OS=Leptospira santarosai str. AIM
GN=LEP1GSC070_1117 PE=4 SV=1 ; EVALUE=3e-10 ;
Q/S_length_ratio=0.422"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M6GQ41|M6GQ41_9LEPT ;
ALN/Q_length_ratio=0.926 ; DESCRIPTION=Homeodomain-like
domain protein OS=Leptospira santarosai str. 2000027870
GN=LEP1GSC039_1392 PE=4 SV=1 ; EVALUE=4e-10 ;
Q/S_length_ratio=0.366"
/note="Pfam_scan:hit_1 (29..88); Pfam:PF13592.1:HTH_33;
Pfam_type:Domain;HMM_aln_Length:55; HMM_Length:60;
EVALUE:8.3e-11; BITSCORE: 41.2"
BEGIN
1 MGGPGFLTGA PECQVLGCLD RPPTAYGFDT DLWTARRVPE RIHTRFGVRF HPSDLREWLS
61 ARNDSPQKPA RPARQRDQSG IDRWVARDRE RIQKRPGPSA HLVPIDETGL FLNPLGPRGR
121 TR
//