LOCUS VTR95471.1 252 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana 2-c-methyl-d-erythritol 4-phosphate
cytidylyltransferase : 2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=ispD
PE=3 SV=1: IspD protein.
ACCESSION LR593886-4772
PROTEIN_ID VTR95471.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_22430"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DID5|L0DID5_SINAD ;
ALN/Q_length_ratio=0.984 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=ispD
PE=3 SV=1 ; EVALUE=3e-77 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SMT1|F0SMT1_PLABD ;
ALN/Q_length_ratio=0.893 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Planctomyces brasiliensis (strain
ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM
1448) GN=ispD PE=3 SV=1 ; EVALUE=8e-66 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A3ZYI5|A3ZYI5_9PLAN ;
ALN/Q_length_ratio=0.873 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Blastopirellula marina DSM 3645
GN=ispD PE=3 SV=1 ; EVALUE=1e-65 ; Q/S_length_ratio=1.100"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R5R8|D2R5R8_PIRSD ;
ALN/Q_length_ratio=0.960 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=ispD PE=3 SV=1 ;
EVALUE=6e-63 ; Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5SRS5|D5SRS5_PLAL2 ;
ALN/Q_length_ratio=0.917 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=ispD PE=3 SV=1
; EVALUE=2e-61 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|E8R3V0|E8R3V0_ISOPI ;
ALN/Q_length_ratio=1.024 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=ispD PE=3 SV=1 ; EVALUE=4e-61
; Q/S_length_ratio=0.969"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6C1E6|A6C1E6_9PLAN ;
ALN/Q_length_ratio=0.913 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Planctomyces maris DSM 8797
GN=ispD PE=3 SV=1 ; EVALUE=1e-60 ; Q/S_length_ratio=0.933"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A9LGP4|A9LGP4_9BACT ;
ALN/Q_length_ratio=0.944 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=uncultured planctomycete 5H12
GN=ispD PE=3 SV=1 ; EVALUE=7e-57 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F6B566|F6B566_DESCC ;
ALN/Q_length_ratio=0.909 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Desulfotomaculum carboxydivorans
(strain DSM 14880 / VKM B-2319 / CO-1-SRB) GN=ispD PE=3
SV=1 ; EVALUE=5e-50 ; Q/S_length_ratio=1.077"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D8PHD6|D8PHD6_9BACT ;
ALN/Q_length_ratio=0.913 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Candidatus Nitrospira defluvii
GN=ispD PE=3 SV=1 ; EVALUE=3e-48 ; Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5SXD5|M5SXD5_9PLAN ;
ALN/Q_length_ratio=0.984 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Rhodopirellula sp. SWK7 GN=ispDF
PE=3 SV=1 ; EVALUE=4e-46 ; Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C0GIM2|C0GIM2_9FIRM ;
ALN/Q_length_ratio=0.901 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Dethiobacter alkaliphilus AHT 1
GN=ispD PE=3 SV=1 ; EVALUE=5e-46 ; Q/S_length_ratio=1.086"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|X1RTV5|X1RTV5_9ZZZZ ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S12H4_L02426 (Fragment) OS=marine
sediment metagenome GN=S12H4_17235 PE=4 SV=1 ;
EVALUE=5e-46 ; Q/S_length_ratio=1.212"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A074LMI4|A0A074LMI4_9BACL ;
ALN/Q_length_ratio=0.893 ;
DESCRIPTION=2-C-methyl-D-erythritol 4-phosphate
cytidylyltransferase OS=Tumebacillus flagellatus GN=ispD
PE=3 SV=1 ; EVALUE=2e-45 ; Q/S_length_ratio=1.086"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F7NMH9|F7NMH9_9FIRM ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Bifunctional enzyme
IspD/IspF OS=Acetonema longum DSM 6540 GN=ispDF PE=3 SV=1
; EVALUE=3e-45 ; Q/S_length_ratio=0.582"
/note="Pfam_scan:hit_1 (4..229); Pfam:PF01128.14:IspD;
Pfam_type:Family;HMM_aln_Length:218; HMM_Length:221;
EVALUE:1.1e-59; BITSCORE: 201.6"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0006629"
/note="GO_domain:GO:0009058"
/note="Enzyme_Code:EC:2.7.7.60"
BEGIN
1 MSQCAVIIPA AGRSSRFGGA EKKPFVSLDG RPVWQRTAEV FWSRPDVSKV YLVIAPEDRD
61 DFRTRFRPLL VFVENVEVVE GGAERFESVA NALARVPEDV QLVAVHDAVR PLVTPALLDS
121 VFHAAKEHGA AMLAVPVADT LKQVDPATNR ITGTVPRAGV WQAQTPQVFR RDWLVEAYAR
181 RTSLNVPITD DAQLIEAIGH SVVVVPSAPI NFKITTKDDL DLAAAILKAR SAAKASEPEG
241 PRWGAFDDEA KW
//