LOCUS VTR95386.1 763 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana secretion protein : Efflux transporter,
RND family, MFP subunit OS=uncultured planctomycete GN=
HGMM_F01A04C20 PE=4 SV=1: Biotin_lipoyl_2: HlyD_3: HlyD_2
protein.
ACCESSION LR593886-4687
PROTEIN_ID VTR95386.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_23280"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5S887|H5S887_9BACT ;
ALN/Q_length_ratio=1.058 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=uncultured planctomycete
GN=HGMM_F01A04C20 PE=4 SV=1 ; EVALUE=3e-39 ;
Q/S_length_ratio=0.932"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q47CS4|Q47CS4_DECAR ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=Secretion protein
HlyD OS=Dechloromonas aromatica (strain RCB) GN=Daro_2627
PE=4 SV=1 ; EVALUE=6e-28 ; Q/S_length_ratio=1.912"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A1HRM6|A1HRM6_9FIRM ;
ALN/Q_length_ratio=0.433 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Thermosinus carboxydivorans
Nor1 GN=TcarDRAFT_1369 PE=4 SV=1 ; EVALUE=7e-25 ;
Q/S_length_ratio=1.812"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q47DU1|Q47DU1_DECAR ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=Secretion protein
HlyD OS=Dechloromonas aromatica (strain RCB) GN=Daro_2253
PE=4 SV=1 ; EVALUE=4e-24 ; Q/S_length_ratio=1.917"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|Q1IUJ7|Q1IUJ7_KORVE ;
ALN/Q_length_ratio=0.374 ; DESCRIPTION=Secretion protein
HlyD OS=Koribacter versatilis (strain Ellin345)
GN=Acid345_0448 PE=4 SV=1 ; EVALUE=1e-23 ;
Q/S_length_ratio=1.966"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B9M0R1|B9M0R1_GEODF ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=Metal ion efflux
pump, RND family, membrane fusion protein OS=Geobacter
daltonii (strain DSM 22248 / JCM 15807 / FRC-32)
GN=Geob_2563 PE=4 SV=1 ; EVALUE=4e-23 ;
Q/S_length_ratio=1.655"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K2PN78|K2PN78_9FLAO ;
ALN/Q_length_ratio=0.460 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Galbibacter marinus
GN=I215_14733 PE=4 SV=1 ; EVALUE=1e-22 ;
Q/S_length_ratio=1.966"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|V2HQ24|V2HQ24_9BURK ;
ALN/Q_length_ratio=0.387 ; DESCRIPTION=RND transporter MFP
subunit OS=Cupriavidus sp. HPC(L) GN=B551_0217765 PE=4
SV=1 ; EVALUE=1e-22 ; Q/S_length_ratio=2.029"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E8WJM8|E8WJM8_GEOS8 ;
ALN/Q_length_ratio=0.433 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Geobacter sp. (strain M18)
GN=GM18_2075 PE=4 SV=1 ; EVALUE=1e-22 ;
Q/S_length_ratio=1.613"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L7U6G0|L7U6G0_MYXSD ;
ALN/Q_length_ratio=0.387 ; DESCRIPTION=RND family heavy
metal efflux transporter MFP subunit OS=Myxococcus
stipitatus (strain DSM 14675 / JCM 12634 / Mx s8)
GN=MYSTI_01860 PE=4 SV=1 ; EVALUE=3e-22 ;
Q/S_length_ratio=1.795"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q74BA5|Q74BA5_GEOSL ;
ALN/Q_length_ratio=0.443 ; DESCRIPTION=Efflux pump, RND
family, membrane fusion protein OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=GSU2136 PE=4 SV=1 ; EVALUE=9e-22 ;
Q/S_length_ratio=1.825"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|S9P673|S9P673_9DELT ;
ALN/Q_length_ratio=0.460 ; DESCRIPTION=Cobalt/zinc/cadmium
efflux RND transporter, membrane fusion protein, CzcB
family OS=Cystobacter fuscus DSM 2262 GN=D187_003859 PE=4
SV=1 ; EVALUE=3e-21 ; Q/S_length_ratio=1.893"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A075KI10|A0A075KI10_9FIRM ;
ALN/Q_length_ratio=0.433 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Pelosinus sp. UFO1 GN=UFO1_3764
PE=4 SV=1 ; EVALUE=6e-21 ; Q/S_length_ratio=1.791"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|W8VZW2|W8VZW2_9FLAO ;
ALN/Q_length_ratio=0.396 ; DESCRIPTION=Probable Co/Zn/Cd
efflux system membrane fusion protein OS=Nonlabens marinus
S1-08 GN=NMS_1262 PE=4 SV=1 ; EVALUE=8e-21 ;
Q/S_length_ratio=1.839"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B5EDI1|B5EDI1_GEOBB ;
ALN/Q_length_ratio=0.431 ; DESCRIPTION=Metal ion efflux
pump, RND family, membrane fusion protein OS=Geobacter
bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
GN=Gbem_2165 PE=4 SV=1 ; EVALUE=1e-20 ;
Q/S_length_ratio=1.673"
/note="Pfam_scan:hit_1 (92..149);
Pfam:PF13533.1:Biotin_lipoyl_2;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:50;
EVALUE:1e-07; BITSCORE: 31.4"
/note="Pfam_scan:hit_2 (212..316); Pfam:PF13437.1:HlyD_3;
Pfam_type:Family;HMM_aln_Length:103; HMM_Length:105;
EVALUE:6.6e-18; BITSCORE: 64.9"
/note="Pfam_scan:hit_3 (455..749); Pfam:PF12700.2:HlyD_2;
Pfam_type:Family;HMM_aln_Length:300; HMM_Length:328;
EVALUE:1.2e-13; BITSCORE: 50.9"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MRTTPGTRLP HRTALLAVGG LLTIGAAVLI AHEGHAPLPT RGAQVDAEKG TLLLTADARA
61 GADVDTAPVE QSAIEERVPA YASLVAPWPN QAFATARVPG RVVRVAVTPG QRIAVGDTIA
121 EIESLEIDTL QLDVLAARTD IALAEKQVAE LTKSADAGAV AGQMVIDAQT RLARNRNALD
181 LARGKWLGLG LPAARLDELL RRGEVLPGLA LPVTAPVSGT VARADLTTGK VVEPAEQLAE
241 VIDLSTVWVR IEVLEKDLRR IAVGQLVELH LAAYPGEVFR TTVRARSQYL DATTNVTTAW
301 AELANPSGSE PRFRPGMSGQ AHLVVTDEAP VPSASANRPP SRKHRLTVPA TAILREGVER
361 FVLVEEANAV GSSEYRKVPV VVGRAAGGRV EVIAGGVFAG DRVVTRGGHE LGPFFAPTVL
421 RPTPEAARNI GLRVEPARVV ALDEIRTLDG AVDVPPAHRG FAASQLAGTI HSIKTDRGRS
481 VTAGEVLGEV FSPELLTMQQ ELLRIHLEVA LAVDRLDRLR SAGVGVAATR VWEQESQVKT
541 LKAQADALRR KLLTVGLIST QIDQLLADKR PVGFAPVRAP FAGVVVNFDK VLGQAAAAHE
601 SLFEVRDPAA RAPIRGFVPE RDTDRIKPGQ VVRARLIADP NFVGRGVVAR SGGTFGAENR
661 TQSIWVDLDT GSAPALLHGQ LATLSIVLGQ RPLALAVPRS SVATEGTAAF VFVQKTDGTL
721 DRRPVEIGPT DDRFVTITRG LADGEPVAVA GVNELMTAFS SLR
//