LOCUS VTR95369.1 983 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rne rng family : Hypothetical conserved
protein OS=uncultured planctomycete GN=HGMM_F07G10C15
PE=4 SV=1: S1: RNase_E_G protein.
ACCESSION LR593886-4670
PROTEIN_ID VTR95369.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_23450"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DF99|L0DF99_SINAD ;
ALN/Q_length_ratio=0.422 ; DESCRIPTION=Ribonuclease G and
E OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_3259 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.893"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E8R4U6|E8R4U6_ISOPI ;
ALN/Q_length_ratio=0.459 ; DESCRIPTION=Ribonuclease,
Rne/Rng family OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_1104 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.667"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SC01|H5SC01_9BACT ;
ALN/Q_length_ratio=0.419 ; DESCRIPTION=Hypothetical
conserved protein OS=uncultured planctomycete
GN=HGMM_F07G10C15 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.538"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A3ZLB1|A3ZLB1_9PLAN ;
ALN/Q_length_ratio=0.417 ; DESCRIPTION=Ribonuclease E
OS=Blastopirellula marina DSM 3645 GN=DSM3645_09102 PE=4
SV=1 ; EVALUE=1e-176 ; Q/S_length_ratio=1.672"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6C9Q8|A6C9Q8_9PLAN ;
ALN/Q_length_ratio=0.443 ; DESCRIPTION=Ribonuclease E
OS=Planctomyces maris DSM 8797 GN=PM8797T_06947 PE=4 SV=1
; EVALUE=1e-172 ; Q/S_length_ratio=1.894"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D2R4N9|D2R4N9_PIRSD ;
ALN/Q_length_ratio=0.417 ; DESCRIPTION=Ribonuclease,
Rne/Rng family OS=Pirellula staleyi (strain ATCC 27377 /
DSM 6068 / ICPB 4128) GN=Psta_2436 PE=4 SV=1 ;
EVALUE=1e-171 ; Q/S_length_ratio=1.810"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D5SPH8|D5SPH8_PLAL2 ;
ALN/Q_length_ratio=0.436 ; DESCRIPTION=Ribonuclease,
Rne/Rng family OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_0357 PE=4 SV=1
; EVALUE=1e-169 ; Q/S_length_ratio=1.831"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5RWX8|M5RWX8_9PLAN ;
ALN/Q_length_ratio=0.424 ; DESCRIPTION=Ribonuclease,
Rne/Rng family OS=Rhodopirellula europaea SH398
GN=RESH_05636 PE=4 SV=1 ; EVALUE=1e-168 ;
Q/S_length_ratio=1.841"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q7UMT7|Q7UMT7_RHOBA ;
ALN/Q_length_ratio=0.424 ; DESCRIPTION=Ribonuclease E
OS=Rhodopirellula baltica (strain SH1) GN=rne PE=4 SV=1 ;
EVALUE=1e-168 ; Q/S_length_ratio=1.841"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5E8N2|K5E8N2_RHOBT ;
ALN/Q_length_ratio=0.424 ; DESCRIPTION=Ribonuclease,
Rne/Rng family OS=Rhodopirellula baltica SH28
GN=RBSH_02492 PE=4 SV=1 ; EVALUE=1e-168 ;
Q/S_length_ratio=1.841"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L7CEF0|L7CEF0_RHOBT ;
ALN/Q_length_ratio=0.424 ; DESCRIPTION=Ribonuclease,
Rne/Rng family OS=Rhodopirellula baltica SWK14
GN=RBSWK_03934 PE=4 SV=1 ; EVALUE=1e-168 ;
Q/S_length_ratio=1.841"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M2AVW7|M2AVW7_9PLAN ;
ALN/Q_length_ratio=0.424 ; DESCRIPTION=Ribonuclease,
Rne/Rng family OS=Rhodopirellula europaea 6C GN=RE6C_05551
PE=4 SV=1 ; EVALUE=1e-168 ; Q/S_length_ratio=1.841"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2AZ64|F2AZ64_RHOBT ;
ALN/Q_length_ratio=0.424 ; DESCRIPTION=Ribonuclease,
Rne/Rng family OS=Rhodopirellula baltica WH47
GN=RBWH47_02321 PE=4 SV=1 ; EVALUE=1e-168 ;
Q/S_length_ratio=1.841"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5RK47|M5RK47_9PLAN ;
ALN/Q_length_ratio=0.430 ; DESCRIPTION=Ribonuclease E
OS=Rhodopirellula maiorica SM1 GN=RMSM_03368 PE=4 SV=1 ;
EVALUE=1e-167 ; Q/S_length_ratio=1.841"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F0SGM4|F0SGM4_PLABD ;
ALN/Q_length_ratio=0.415 ; DESCRIPTION=RNAse E
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_4052 PE=4
SV=1 ; EVALUE=1e-166 ; Q/S_length_ratio=1.841"
/note="Pfam_scan:hit_1 (36..84); Pfam:PF00575.18:S1;
Pfam_type:Domain;HMM_aln_Length:35; HMM_Length:74;
EVALUE:2.8e-06; BITSCORE: 27.3"
/note="Pfam_scan:hit_2 (570..841);
Pfam:PF10150.4:RNase_E_G;
Pfam_type:Family;HMM_aln_Length:270; HMM_Length:271;
EVALUE:4.9e-104; BITSCORE: 347.3"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0004518"
/note="Enzyme_Code:EC:3.1"
BEGIN
1 MKKEMLINVL QPEECRIAIV EDGVLEELYV ERASQESYVG NIYKGRIVNI EPSIQAAFVD
61 FGIGRNGFLH VSDVDPAYYK HLLSKADLAE YEAELDREYG GGNSSGGGRG RDRGGRGGRD
121 RGAKPPREMT SWLEPAPSAA RSDEFIEAPD FASGIDDEDN VPVAEAVSDE GDAGEVAELD
181 TVEVDAVEVD AVEVEVAEAE TVEEDAPVEV LSSDDDDDGF AAGLEDVPAP VTKAPAPQPK
241 RAESPRVEAR RFVVQPPVED DEFGAGIVDA ELPSARAPEI LRSVEPVVPE VPAVAEAIDA
301 IEGGDPVPPV EVTEPEAKKP RTRRSKPKAE DAAEEPSEGK PKSRTRRPKK KEGEGETDGD
361 GADDKPKYMG GAERRTAAGD DEGEIKPFFD DGGSADFDPD APNDRFASAS RSDDEGAESA
421 EPVERFSDDV EPAEAAEQEA RDFAHEAEEP AEAEVTGRGF NDDFDSGPRR ENDRGRGGRG
481 DRDRSRGGSR GGRDDRGRGG PRGDRDRGPD RGPRGAGGFK GGPGGPKGGR DRGLPKPPIQ
541 EIFKRGQEVI VQVIKEAVGT KGPTLSTYVS IAGRYLVLMP SLNRVGVSRK IEDHDARRRL
601 REIMTTLAPP KGVGFIVRTA AVDRDAKELQ NDLAYLLRLW QVVVKRLKRV AGPVEIYRES
661 DMITRTIRDI FTSDIDTIWV DEATAYGHAS EFLQIVMPKF ANRIKHFDHT EPLFHRYAIE
721 DEIAKIHQKR IEMPLGGSLV IEQTEALVAI DVNSGNFRAD NNAEETAFQM NLHAAKEIAR
781 QLRLRDLGGV IVNDFIDMRS ESHRRKVEDA FREALRRDRA RTKILRISQF GLIEMTRQRI
841 RPSLKRSIFS DCPHCRANGF VKTSESLAIE VMRLLHLAAH RAPAVQVVQV GVHVDAANYL
901 LNKRRKEIAA LEERGKLEVQ ITGQPGVSPD LMSVRCFDHN GNEVRLLPPA PLPKLTAGRV
961 PPRDDRGRGG RDDRGGRYPR PLD
//