LOCUS VTR95361.1 421 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna helicase : ATP-dependent RNA helicase
RhlE OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586
/ JCM 11422 / NBRC 100505) GN=rhlE PE=3 SV=1: DEAD: Helicase_C
protein.
ACCESSION LR593886-4662
PROTEIN_ID VTR95361.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_23530"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|U5QI28|U5QI28_9CYAN ;
ALN/Q_length_ratio=0.903 ; DESCRIPTION=ATP-dependent RNA
helicase RhlE OS=Gloeobacter kilaueensis JS1 GN=rhlE PE=3
SV=1 ; EVALUE=1e-139 ; Q/S_length_ratio=0.968"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|C1AE59|C1AE59_GEMAT ;
ALN/Q_length_ratio=0.888 ; DESCRIPTION=ATP-dependent RNA
helicase RhlE OS=Gemmatimonas aurantiaca (strain T-27 /
DSM 14586 / JCM 11422 / NBRC 100505) GN=rhlE PE=3 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=0.845"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q2YZZ9|Q2YZZ9_9BACT ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=Uncharacterized
protein OS=uncultured Aminicenantes bacterium PE=3 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L0A2L4|L0A2L4_DEIPD ;
ALN/Q_length_ratio=0.881 ; DESCRIPTION=DNA/RNA helicase,
superfamily II OS=Deinococcus peraridilitoris (strain DSM
19664 / LMG 22246 / CIP 109416 / KR-200) GN=Deipe_2643
PE=3 SV=1 ; EVALUE=1e-134 ; Q/S_length_ratio=0.883"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W0RNA2|W0RNA2_9BACT ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Gemmatimonadetes bacterium
KBS708 GN=J421_4258 PE=3 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=0.886"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q7NI59|Q7NI59_GLOVI ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=Gll2325 protein
OS=Gloeobacter violaceus (strain PCC 7421) GN=gll2325 PE=3
SV=1 ; EVALUE=1e-131 ; Q/S_length_ratio=1.096"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|I3IP41|I3IP41_9PLAN ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=DEAD/DEAH box
helicase OS=planctomycete KSU-1 GN=KSU1_D0177 PE=3 SV=1 ;
EVALUE=1e-130 ; Q/S_length_ratio=0.955"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E8WKY3|E8WKY3_GEOS8 ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Geobacter sp. (strain M18)
GN=GM18_3379 PE=4 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=0.901"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B5EAF1|B5EAF1_GEOBB ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=ATP-dependent RNA
helicase RhlE OS=Geobacter bemidjiensis (strain Bem / ATCC
BAA-1014 / DSM 16622) GN=rhlE-2 PE=4 SV=1 ; EVALUE=1e-128
; Q/S_length_ratio=0.894"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5MJS0|D5MJS0_9BACT ;
ALN/Q_length_ratio=0.893 ; DESCRIPTION=Putative
ATP-dependent RNA helicase with P-loop hydrolase domain
(RhlE gene) OS=Candidatus Methylomirabilis oxyfera
GN=DAMO_0421 PE=3 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.879"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|B3E6S6|B3E6S6_GEOLS ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=Glov_2618 PE=4 SV=1 ;
EVALUE=1e-128 ; Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C6E274|C6E274_GEOSM ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Geobacter sp. (strain M21)
GN=GM21_0954 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A7NHW1|A7NHW1_ROSCS ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Roseiflexus castenholzii
(strain DSM 13941 / HLO8) GN=Rcas_0944 PE=4 SV=1 ;
EVALUE=1e-126 ; Q/S_length_ratio=0.936"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D7AH58|D7AH58_GEOSK ;
ALN/Q_length_ratio=1.007 ; DESCRIPTION=ATP-dependent RNA
helicase RhlE OS=Geobacter sulfurreducens (strain DL-1 /
KN400) GN=rhlE-2 PE=4 SV=1 ; EVALUE=1e-126 ;
Q/S_length_ratio=0.944"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A5UZK3|A5UZK3_ROSS1 ;
ALN/Q_length_ratio=0.990 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Roseiflexus sp. (strain RS-1)
GN=RoseRS_3701 PE=4 SV=1 ; EVALUE=1e-126 ;
Q/S_length_ratio=0.901"
/note="Pfam_scan:hit_1 (25..192); Pfam:PF00270.24:DEAD;
Pfam_type:Domain;HMM_aln_Length:167; HMM_Length:169;
EVALUE:2.3e-42; BITSCORE: 144.3"
/note="Pfam_scan:hit_2 (260..335);
Pfam:PF00271.26:Helicase_C;
Pfam_type:Family;HMM_aln_Length:72; HMM_Length:78;
EVALUE:1e-22; BITSCORE: 79.7"
/note="GO_domain:GO:0043167"
BEGIN
1 MPFKALGLHP LLVRATQELG YKEPTPVQAG SIPPGLAGRD IIATAQTGTG KTAAFLLPIL
61 HRLIGQPRGG TRVLILSPTR ELAEQISEVC NGLAKHTQVR SALVVGGRPM GPQERALRAG
121 TDIIVATPGR LLDFIQRNVA KFDRATTLVL DEADSLFDMG FLPDVRKIIA RMPARSHTLL
181 FSATMPPVIA KLANEILRTP ATVQIGRRSS TAVGITQAAY PVPTHLKTAL LRHLLRETDM
241 PSVLVFTRTK HGAKKIARAV ASDGFTVAEL HSNRTPSQRT TAMEGFRRGK YQVMVATNIA
301 ARGLDVNHIT HVISTDVPDV PEDYVHRIGR TGRGGATGDA FILVSRDEEE SLARIERQVG
361 QRLPRITLPD FDYTVSTPAP AQPKPGNKGS NGNRPAPNNG QQRPQKPKGK RNGPGKPGPR
421 R
//