LOCUS VTR95336.1 360 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana radical sam protein : Radical SAM OS=
Planctomyces maris DSM 8797 GN=PM8797T_09934 PE=4 SV=1:
Radical_SAM protein.
ACCESSION LR593886-4637
PROTEIN_ID VTR95336.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_23780"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A6C322|A6C322_9PLAN ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=Radical SAM
OS=Planctomyces maris DSM 8797 GN=PM8797T_09934 PE=4 SV=1
; EVALUE=1e-145 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D5SXN2|D5SXN2_PLAL2 ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Radical SAM domain
protein OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_1769 PE=4 SV=1 ;
EVALUE=1e-136 ; Q/S_length_ratio=1.023"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A4A0Q3|A4A0Q3_9PLAN ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=DNA repair
photolyase OS=Blastopirellula marina DSM 3645
GN=DSM3645_02091 PE=4 SV=1 ; EVALUE=1e-131 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R686|D2R686_PIRSD ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Radical SAM domain
protein OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
/ ICPB 4128) GN=Psta_0779 PE=4 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F0SIA7|F0SIA7_PLABD ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Radical SAM domain
protein OS=Planctomyces brasiliensis (strain ATCC 49424 /
DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_0873 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B5JJ29|B5JJ29_9BACT ;
ALN/Q_length_ratio=0.931 ; DESCRIPTION=Radical SAM domain
protein OS=Verrucomicrobiae bacterium DG1235
GN=VDG1235_2279 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B4CW73|B4CW73_9BACT ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Radical SAM domain
protein OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_0910 PE=4 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B1ZS28|B1ZS28_OPITP ;
ALN/Q_length_ratio=0.950 ; DESCRIPTION=Radical SAM domain
protein OS=Opitutus terrae (strain DSM 11246 / PB90-1)
GN=Oter_1419 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A077BIH5|A0A077BIH5_STEMA ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Radical SAM
superfamily protein OS=Stenotrophomonas maltophilia
GN=DP16_3676 PE=4 SV=1 ; EVALUE=1e-113 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|I0KHT1|I0KHT1_STEMA ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Radical SAM domain
protein OS=Stenotrophomonas maltophilia D457 GN=SMD_0015
PE=4 SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A064BW23|A0A064BW23_STEMA ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=DNA repair
photolyase OS=Stenotrophomonas maltophilia M30
GN=DF40_016950 PE=4 SV=1 ; EVALUE=1e-112 ;
Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|W7G2W4|W7G2W4_STEMA ;
ALN/Q_length_ratio=0.997 ; DESCRIPTION=Radical SAM protein
OS=Stenotrophomonas maltophilia 5BA-I-2 GN=X548_19190 PE=4
SV=1 ; EVALUE=1e-112 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|G0K256|G0K256_STEMA ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Radical SAM domain
protein OS=Stenotrophomonas maltophilia JV3 GN=BurJV3_0015
PE=4 SV=1 ; EVALUE=1e-112 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A031H3F4|A0A031H3F4_9GAMM ;
ALN/Q_length_ratio=1.011 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Stenotrophomonas sp. RIT309
GN=BW38_03940 PE=4 SV=1 ; EVALUE=1e-112 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5TEM7|M5TEM7_STEMA ;
ALN/Q_length_ratio=1.003 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Stenotrophomonas maltophilia
AU12-09 GN=C405_20519 PE=4 SV=1 ; EVALUE=1e-112 ;
Q/S_length_ratio=0.992"
/note="Pfam_scan:hit_1 (73..253);
Pfam:PF04055.16:Radical_SAM;
Pfam_type:Domain;HMM_aln_Length:162; HMM_Length:166;
EVALUE:1.7e-12; BITSCORE: 47.8"
/note="GO_domain:GO:0003674"
BEGIN
1 MIDARIGLIG RGSNLQPVSR FDSTSKVLAL DVIDLDADDI ATLSNPATEF IPDRTKSVIS
61 ENDSPDVGFR YSLNPYRGCE HGCSYCYARP THEYLGFDAG LGFETKIVVK HDAPKLFRAF
121 LARDAWVPEP IALSGVTDPY QPCERRFRLT RRCLEVAAVS NQPMSIITKN ALVVRDLDLL
181 APMATEGLVH VNVSIGTLNA ALARSMEPRA STPLARLRAV RELSAAGLPV RVLVAPIIPG
241 LNDAEIPTIL EAVKEAGASA AAYTMLRLPW AVAPVFMDWM ARTFPERVER VEGRVRDARG
301 GRLNNSAFDQ RMTGTGVYAE LIRRVFRVFA RRFGLNGGLP PYDCSKFQPP PDANGQGRLF
//