LOCUS VTR95333.1 448 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rnd family efflux transporter mfp subunit
: Efflux transporter, RND family, MFP subunit OS=Pirellula
staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=
Psta_1220 PE=4 SV=1: HlyD_2 protein.
ACCESSION LR593886-4634
PROTEIN_ID VTR95333.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_23810"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2R971|D2R971_PIRSD ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_1220 PE=4 SV=1 ;
EVALUE=2e-60 ; Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L7C6S6|L7C6S6_RHOBT ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula baltica SWK14
GN=RBSWK_06183 PE=4 SV=1 ; EVALUE=5e-40 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A090MH57|A0A090MH57_9BACT ;
ALN/Q_length_ratio=0.730 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=6e-40 ;
Q/S_length_ratio=1.114"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5SDK9|M5SDK9_9PLAN ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Secretion protein
HlyD OS=Rhodopirellula europaea SH398 GN=RESH_03673 PE=4
SV=1 ; EVALUE=2e-39 ; Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M2AHQ3|M2AHQ3_9PLAN ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Secretion protein
HlyD OS=Rhodopirellula europaea 6C GN=RE6C_02591 PE=4 SV=1
; EVALUE=4e-39 ; Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F2APF5|F2APF5_RHOBT ;
ALN/Q_length_ratio=0.875 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula baltica WH47
GN=RBWH47_05160 PE=4 SV=1 ; EVALUE=2e-38 ;
Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q7UZ49|Q7UZ49_RHOBA ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Probable
membrane-fusion protein OS=Rhodopirellula baltica (strain
SH1) GN=RB188 PE=4 SV=1 ; EVALUE=5e-38 ;
Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L0DC93|L0DC93_SINAD ;
ALN/Q_length_ratio=0.862 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_2113 PE=4 SV=1 ; EVALUE=2e-37 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L0D7F3|L0D7F3_SINAD ;
ALN/Q_length_ratio=0.812 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_0100 PE=4 SV=1 ; EVALUE=2e-36 ;
Q/S_length_ratio=0.926"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F0STM3|F0STM3_PLABD ;
ALN/Q_length_ratio=0.900 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_3915 PE=4 SV=1 ; EVALUE=4e-35 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|U5QK78|U5QK78_9CYAN ;
ALN/Q_length_ratio=0.645 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Gloeobacter kilaueensis JS1
GN=GKIL_3116 PE=4 SV=1 ; EVALUE=7e-35 ;
Q/S_length_ratio=1.114"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E7C6I1|E7C6I1_9GAMM ;
ALN/Q_length_ratio=0.759 ; DESCRIPTION=Membrane-fusion
protein OS=uncultured gamma proteobacterium HF0770_07M15
PE=4 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=1.067"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|E8UZV2|E8UZV2_TERSS ;
ALN/Q_length_ratio=0.857 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Terriglobus saanensis (strain
ATCC BAA-1853 / DSM 23119 / SP1PR4) GN=AciPR4_0191 PE=4
SV=1 ; EVALUE=1e-33 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5T5Y9|M5T5Y9_9PLAN ;
ALN/Q_length_ratio=0.895 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula sp. SWK7
GN=RRSWK_06580 PE=4 SV=1 ; EVALUE=2e-33 ;
Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5RR62|M5RR62_9PLAN ;
ALN/Q_length_ratio=0.828 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Rhodopirellula maiorica SM1
GN=RMSM_01252 PE=4 SV=1 ; EVALUE=5e-31 ;
Q/S_length_ratio=1.039"
/note="Pfam_scan:hit_1 (82..424); Pfam:PF12700.2:HlyD_2;
Pfam_type:Family;HMM_aln_Length:281; HMM_Length:328;
EVALUE:1.7e-23; BITSCORE: 83.2"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MRRDLSFVLA AALGVAPAVG CNQKSPPPGG AAPAPATPIT VVKPERRAIK RVIEQPGTVT
61 AFEETVLHAK LPGFVGKIAD DPEKANRPPH DRQTDIGSRV KAGQVLAVLT MPELDEEWKQ
121 KVALVKQAEA EVVQSEKAAE AMKAGVTAAE SLVTVAEAGV DRSQALYERW QKEVDRIAKL
181 LGNGVGDSQT LDETKNQLRA AEAGQKEATA RVTAARAAVK KAVADEAKAV ADVVGAKAKL
241 EVARAEVNRL DALRSYTAIK APFDGVVTRR SVNTGDLVSG TEKTGLFTVA RTDPVRVVVN
301 VPEADAGQVA VGQDVRLALQ GPEQVGKVIR TSWSLEPGSR TLRTEIDLPN EIGALRPGMF
361 VHAKLTIELP AAWSVPAAAV GKSGDDAIMY TVESGKAARV TVQLIKGDGQ FTQVRRYKKS
421 SATDWTDVTG SEQFASPTAA LADGQAVP
//