LOCUS VTR95263.1 225 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana transcriptional regulator : Response
regulator with CheY-like receiver domain and winged-helix
DNA-binding domain OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_0888
PE=4 SV=1: Response_reg: Trans_reg_C protein.
ACCESSION LR593886-4564
PROTEIN_ID VTR95263.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_24510"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0D8Y7|L0D8Y7_SINAD ;
ALN/Q_length_ratio=0.987 ; DESCRIPTION=Response regulator
with CheY-like receiver domain and winged-helix
DNA-binding domain OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_0888 PE=4 SV=1 ; EVALUE=1e-106 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6CDX9|A6CDX9_9PLAN ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Two component
transcriptional regulator, winged helix family protein
OS=Planctomyces maris DSM 8797 GN=PM8797T_01954 PE=4 SV=1
; EVALUE=1e-101 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0D7S9|L0D7S9_SINAD ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Response regulator
with CheY-like receiver domain and winged-helix
DNA-binding domain OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_0424 PE=4 SV=1 ; EVALUE=2e-99 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5TE50|M5TE50_9PLAN ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Two component heavy
metal response transcriptional regulator, winged helix
family OS=Rhodopirellula sp. SWK7 GN=RRSWK_00025 PE=4 SV=1
; EVALUE=2e-98 ; Q/S_length_ratio=0.904"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DB38|L0DB38_SINAD ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Response regulator
with CheY-like receiver domain and winged-helix
DNA-binding domain OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_2112 PE=4 SV=1 ; EVALUE=1e-96 ;
Q/S_length_ratio=0.966"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A089WLV8|A0A089WLV8_9PSED ;
ALN/Q_length_ratio=0.982 ; DESCRIPTION=Transcriptional
regulator OS=Pseudomonas cremoricolorata GN=LK03_13695
PE=4 SV=1 ; EVALUE=4e-71 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|U5VFG1|U5VFG1_9PSED ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Two component heavy
metal response transcriptional regulator OS=Pseudomonas
sp. VLB120 GN=PVLB_08005 PE=4 SV=1 ; EVALUE=1e-69 ;
Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A099E2Y7|A0A099E2Y7_9PSED ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Transcriptional
regulator OS=Pseudomonas sp. H2 GN=MD26_15855 PE=4 SV=1 ;
EVALUE=2e-69 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A084C9X3|A0A084C9X3_9PSED ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Transcriptional
regulator OS=Pseudomonas sp. WCS358 GN=PC358_13095 PE=4
SV=1 ; EVALUE=2e-69 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|J3CX91|J3CX91_9BURK ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=Response regulator
with CheY-like receiver domain and winged-helix
DNA-binding domain OS=Variovorax sp. CF313 GN=PMI12_00037
PE=4 SV=1 ; EVALUE=4e-69 ; Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|E4R977|E4R977_PSEPB ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Two component heavy
metal response transcriptional regulator OS=Pseudomonas
putida (strain BIRD-1) GN=PPUBIRD1_3496 PE=4 SV=1 ;
EVALUE=6e-69 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|V4GYG0|V4GYG0_PSEPU ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Transcriptional
regulator OS=Pseudomonas putida S12 GN=RPPX_20135 PE=4
SV=1 ; EVALUE=6e-69 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q88KY1|Q88KY1_PSEPK ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=DNA-binding heavy
metal response regulator OS=Pseudomonas putida (strain
KT2440) GN=PP_2158 PE=4 SV=1 ; EVALUE=6e-69 ;
Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|U2SC62|U2SC62_PSEPU ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Transcriptional
regulator OS=Pseudomonas putida LF54 GN=O999_14735 PE=4
SV=1 ; EVALUE=1e-68 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I3UPZ9|I3UPZ9_PSEPU ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Two component heavy
metal response transcriptional regulator OS=Pseudomonas
putida ND6 GN=YSA_01465 PE=4 SV=1 ; EVALUE=1e-68 ;
Q/S_length_ratio=0.996"
/note="Pfam_scan:hit_1 (5..115);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:111; HMM_Length:112;
EVALUE:2.5e-25; BITSCORE: 88.6"
/note="Pfam_scan:hit_2 (147..221);
Pfam:PF00486.23:Trans_reg_C;
Pfam_type:Domain;HMM_aln_Length:76; HMM_Length:77;
EVALUE:6.4e-25; BITSCORE: 86.8"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
BEGIN
1 MGIRILLVED ETAIGDFVAR GLREEGYSVE WATDGDAGWH HLRTAVWDVV LLDWWLPGPN
61 GLTLLKKFRQ AGCDTPVLML TARDAVSDRV QGLDCGADDY LCKPFAFEEL LARVRALARR
121 PGATAGTVLS YADVYLDLAT HRAERAGTKL DLTAKEESLL VLFLRHPGEV LSRTRIYEAV
181 WDERYDGISN TLEVHVMELR KKLEAHGPRL IQTVRGRGYV FGELE
//