LOCUS VTR95072.1 196 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana integrase-recombinase protein : Marine
sediment metagenome DNA, contig: S01H1_L00378 OS=marine
sediment metagenome GN=S01H1_04139 PE=4 SV=1: Phage_integrase
protein.
ACCESSION LR593886-4373
PROTEIN_ID VTR95072.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_26420"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|X0SNN7|X0SNN7_9ZZZZ ;
ALN/Q_length_ratio=0.837 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L00378 OS=marine sediment
metagenome GN=S01H1_04139 PE=4 SV=1 ; EVALUE=1e-24 ;
Q/S_length_ratio=0.695"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DJ84|L0DJ84_SINAD ;
ALN/Q_length_ratio=0.852 ; DESCRIPTION=Site-specific
recombinase XerD OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4560
PE=4 SV=1 ; EVALUE=3e-18 ; Q/S_length_ratio=0.506"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|T1AFH7|T1AFH7_9ZZZZ ;
ALN/Q_length_ratio=0.760 ;
DESCRIPTION=Integrase-recombinase protein (Fragment)
OS=mine drainage metagenome GN=B1A_11743 PE=4 SV=1 ;
EVALUE=7e-18 ; Q/S_length_ratio=1.107"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|X0XHQ9|X0XHQ9_9ZZZZ ;
ALN/Q_length_ratio=0.847 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S28344 (Fragment) OS=marine
sediment metagenome GN=S01H1_65329 PE=4 SV=1 ;
EVALUE=3e-17 ; Q/S_length_ratio=0.781"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5TYC8|M5TYC8_9PLAN ;
ALN/Q_length_ratio=0.985 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_04495 PE=4 SV=1
; EVALUE=4e-16 ; Q/S_length_ratio=0.467"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5SU81|M5SU81_9PLAN ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Tyrosine
recombinase XerD OS=Rhodopirellula sp. SWK7 GN=RRSWK_06961
PE=4 SV=1 ; EVALUE=1e-14 ; Q/S_length_ratio=0.427"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|X1J4S8|X1J4S8_9ZZZZ ;
ALN/Q_length_ratio=0.776 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_S26379 (Fragment) OS=marine
sediment metagenome GN=S03H2_65702 PE=4 SV=1 ;
EVALUE=1e-13 ; Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M2AG18|M2AG18_9PLAN ;
ALN/Q_length_ratio=0.811 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein (Fragment)
OS=Rhodopirellula europaea 6C GN=RE6C_03211 PE=4 SV=1 ;
EVALUE=1e-12 ; Q/S_length_ratio=0.464"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|X0TPC8|X0TPC8_9ZZZZ ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L08296 (Fragment) OS=marine
sediment metagenome GN=S01H1_18858 PE=4 SV=1 ;
EVALUE=2e-12 ; Q/S_length_ratio=1.101"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|X0ZHI7|X0ZHI7_9ZZZZ ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H4_L00480 OS=marine sediment
metagenome GN=S01H4_14198 PE=4 SV=1 ; EVALUE=3e-12 ;
Q/S_length_ratio=0.700"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5TSZ5|M5TSZ5_9PLAN ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=Site-specific
recombinase, phage integrase family protein
OS=Rhodopirellula sallentina SM41 GN=RSSM_06380 PE=4 SV=1
; EVALUE=5e-12 ; Q/S_length_ratio=0.370"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|X1UF95|X1UF95_9ZZZZ ;
ALN/Q_length_ratio=0.888 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S12H4_S13206 (Fragment) OS=marine
sediment metagenome GN=S12H4_44744 PE=4 SV=1 ;
EVALUE=6e-12 ; Q/S_length_ratio=0.766"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5R6X7|M5R6X7_9PLAN ;
ALN/Q_length_ratio=0.821 ; DESCRIPTION=Integrase,
catalytic core, phage domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_07826 PE=4 SV=1 ; EVALUE=2e-11 ;
Q/S_length_ratio=0.369"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|Q7UJ13|Q7UJ13_RHOBA ;
ALN/Q_length_ratio=0.923 ; DESCRIPTION=Probable
integrase-recombinase protein OS=Rhodopirellula baltica
(strain SH1) GN=RB12202 PE=4 SV=1 ; EVALUE=1e-10 ;
Q/S_length_ratio=0.362"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L7CAI7|L7CAI7_RHOBT ;
ALN/Q_length_ratio=0.923 ;
DESCRIPTION=Integrase-recombinase protein
OS=Rhodopirellula baltica SWK14 GN=RBSWK_05106 PE=4 SV=1 ;
EVALUE=3e-10 ; Q/S_length_ratio=0.346"
/note="Pfam_scan:hit_1 (1..174);
Pfam:PF00589.17:Phage_integrase;
Pfam_type:Family;HMM_aln_Length:145; HMM_Length:173;
EVALUE:2.9e-16; BITSCORE: 59.6"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0006259"
BEGIN
1 MLDATRASER VYRRTMTGED RYHLYLTAFA TGFRLSELAA LTPAHFRLEA EPPTVALPGK
61 TAKNKKSVRP PLPPTVASAL RAYLVGKPAK ERIWAGKWTD SAAGMLKFDL EAAGVPYEVE
121 TPAGKEYADF HALRHTFVLS LAATGAGTKE LQTLARHSDP RLTLNVYAHA RSAALVEAVG
181 RLQIPGAARP PPRSPT
//