LOCUS VTR95048.1 164 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dtdp-4-dehydrorhamnose -epimerase :
dTDP-4-dehydrorhamnose 35-epimerase related protein OS=
Geobacter sp. (strain M18) GN=GM18_2321 PE=4 SV=1: dTDP_sugar_isom
protein.
ACCESSION LR593886-4349
PROTEIN_ID VTR95048.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_26660"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8WMH0|E8WMH0_GEOS8 ;
ALN/Q_length_ratio=0.939 ;
DESCRIPTION=dTDP-4-dehydrorhamnose 35-epimerase related
protein OS=Geobacter sp. (strain M18) GN=GM18_2321 PE=4
SV=1 ; EVALUE=7e-69 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B5EG06|B5EG06_GEOBB ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=Nucleoside
diphosphate-sugar dehydratase, putative OS=Geobacter
bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622)
GN=Gbem_2463 PE=4 SV=1 ; EVALUE=8e-67 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B9M5R4|B9M5R4_GEODF ;
ALN/Q_length_ratio=0.945 ;
DESCRIPTION=Nucleoside-5'-diphosphate-sugar dehydratase,
putative OS=Geobacter daltonii (strain DSM 22248 / JCM
15807 / FRC-32) GN=Geob_3480 PE=4 SV=1 ; EVALUE=5e-66 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q74BF9|Q74BF9_GEOSL ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=Nucleoside
diphosphate-sugar dehydratase, putative OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=GSU2082 PE=4 SV=1 ; EVALUE=7e-66 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D7AL62|D7AL62_GEOSK ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=Nucleoside
diphosphate-sugar dehydratase, putative OS=Geobacter
sulfurreducens (strain DL-1 / KN400) GN=KN400_2104 PE=4
SV=1 ; EVALUE=7e-66 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q39X57|Q39X57_GEOMG ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Nucleoside
diphosphate-sugar dehydratase, putative OS=Geobacter
metallireducens (strain GS-15 / ATCC 53774 / DSM 7210)
GN=Gmet_0925 PE=4 SV=1 ; EVALUE=2e-65 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|H1L978|H1L978_GEOME ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Putative
uncharacterized protein OS=Geobacter metallireducens RCH3
GN=GeomeDRAFT_2575 PE=4 SV=1 ; EVALUE=2e-65 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|C6E6G7|C6E6G7_GEOSM ;
ALN/Q_length_ratio=0.939 ;
DESCRIPTION=dTDP-4-dehydrorhamnose 3 5-epimerase and
related enzymes-like protein OS=Geobacter sp. (strain M21)
GN=GM21_1754 PE=4 SV=1 ; EVALUE=2e-65 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A5G5G6|A5G5G6_GEOUR ;
ALN/Q_length_ratio=0.945 ;
DESCRIPTION=dTDP-4-dehydrorhamnose 3 5-epimerase and
related enzymes-like protein OS=Geobacter uraniireducens
(strain Rf4) GN=Gura_2861 PE=4 SV=1 ; EVALUE=1e-64 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A062V3Y9|A0A062V3Y9_9EURY ;
ALN/Q_length_ratio=0.841 ;
DESCRIPTION=dTDP-4-dehydrorhamnose 3,5-epimerase-like
enzyme OS=Candidatus Methanoperedens nitroreducens
GN=ANME2D_02534 PE=4 SV=1 ; EVALUE=8e-59 ;
Q/S_length_ratio=1.031"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q3ADG0|Q3ADG0_CARHZ ;
ALN/Q_length_ratio=0.945 ;
DESCRIPTION=dTDP-4-dehydrorhamnose 3,5-epimerase
OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008) GN=rfbC PE=4 SV=1 ; EVALUE=5e-57 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|G2SGD2|G2SGD2_RHOMR ;
ALN/Q_length_ratio=0.939 ;
DESCRIPTION=dTDP-4-dehydrorhamnose 3 5-epimerase and
related enzymes-like protein OS=Rhodothermus marinus
SG0.5JP17-172 GN=Rhom172_1408 PE=4 SV=1 ; EVALUE=6e-56 ;
Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D0MID3|D0MID3_RHOM4 ;
ALN/Q_length_ratio=0.939 ;
DESCRIPTION=dTDP-4-dehydrorhamnose 3 5-epimerase and
related enzymes-like protein OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=Rmar_1352 PE=4
SV=1 ; EVALUE=5e-54 ; Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|X0SSH2|X0SSH2_9ZZZZ ;
ALN/Q_length_ratio=0.841 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_L03975 (Fragment) OS=marine
sediment metagenome GN=S01H1_11376 PE=4 SV=1 ;
EVALUE=9e-45 ; Q/S_length_ratio=1.163"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S0ESS4|S0ESS4_CHTCT ;
ALN/Q_length_ratio=0.848 ;
DESCRIPTION=dTDP-4-dehydrorhamnose 3,5-epimerase and
related enzymes OS=Chthonomonas calidirosea (strain DSM
23976 / ICMP 18418 / T49) GN=CCALI_00182 PE=4 SV=1 ;
EVALUE=9e-45 ; Q/S_length_ratio=1.101"
/note="Pfam_scan:hit_1 (9..142);
Pfam:PF00908.12:dTDP_sugar_isom;
Pfam_type:Domain;HMM_aln_Length:125; HMM_Length:177;
EVALUE:1.5e-08; BITSCORE: 34.1"
/note="GO_domain:GO:0044281"
/note="GO_domain:GO:0019748"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:5.1.3.13"
BEGIN
1 MNVPLPKYVE RGPIHDVAWV PLKFFTDPRG WLVELFRNDL VPPQFHPVMA YVSMTKPGVA
61 RGPHEHIDQA DYFCFTGPST FRVYLWDARK DSPTFGAKEV REVGESTPFA LIVPPGVVHA
121 YKNVGDKDGW VFNAANRLYA GWLKQEPVDE IRHEKDPNSP YQLD
//