LOCUS VTR95023.1 414 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rnd transporter mfp subunit : Efflux
transporter, RND family, MFP subunit OS=Burkholderia sp.
(strain CCGE1002) GN=BC1002_5413 PE=4 SV=1: HlyD_2 protein.
ACCESSION LR593886-4324
PROTEIN_ID VTR95023.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_26910"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5WFI9|D5WFI9_BURSC ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Burkholderia sp. (strain
CCGE1002) GN=BC1002_5413 PE=4 SV=1 ; EVALUE=4e-81 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B4DC65|B4DC65_9BACT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_6506 PE=4 SV=1 ; EVALUE=1e-78 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A023NT33|A0A023NT33_9GAMM ;
ALN/Q_length_ratio=0.913 ; DESCRIPTION=RND transporter MFP
subunit OS=Dyella jiangningensis GN=CH75_10635 PE=4 SV=1 ;
EVALUE=1e-78 ; Q/S_length_ratio=1.078"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A0A6QGQ9|A0A0A6QGQ9_9BURK ;
ALN/Q_length_ratio=0.807 ; DESCRIPTION=RND transporter MFP
subunit OS=Burkholderia sacchari GN=NH14_05560 PE=4 SV=1 ;
EVALUE=1e-78 ; Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DQ64|L0DQ64_SINAD ;
ALN/Q_length_ratio=0.886 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_6914 PE=4 SV=1 ; EVALUE=9e-78 ;
Q/S_length_ratio=0.954"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q7NM92|Q7NM92_GLOVI ;
ALN/Q_length_ratio=0.773 ; DESCRIPTION=Gll0875 protein
OS=Gloeobacter violaceus (strain PCC 7421) GN=gll0875 PE=4
SV=1 ; EVALUE=8e-77 ; Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|W4NS93|W4NS93_9BURK ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=Putative Co/Zn/Cd
efflux system membrane fusion protein OS=Burkholderia
caribensis MBA4 GN=K788_003454 PE=4 SV=1 ; EVALUE=9e-77 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W6XDX9|W6XDX9_9BURK ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Burkholderia sp. BT03
GN=PMI06_009250 PE=4 SV=1 ; EVALUE=2e-76 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W0RM32|W0RM32_9BACT ;
ALN/Q_length_ratio=0.872 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Gemmatimonadetes bacterium
KBS708 GN=J421_4269 PE=4 SV=1 ; EVALUE=2e-76 ;
Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A089CLD2|A0A089CLD2_9BURK ;
ALN/Q_length_ratio=0.807 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Burkholderia xenovorans
GN=DR64_2039 PE=4 SV=1 ; EVALUE=4e-76 ;
Q/S_length_ratio=0.887"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q146V2|Q146V2_BURXL ;
ALN/Q_length_ratio=0.807 ; DESCRIPTION=RND efflux pump,
membrane fusion protein, CzcB subfamily OS=Burkholderia
xenovorans (strain LB400) GN=Bxe_A4363 PE=4 SV=1 ;
EVALUE=4e-76 ; Q/S_length_ratio=0.887"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|G8MBC3|G8MBC3_9BURK ;
ALN/Q_length_ratio=0.913 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Burkholderia sp. YI23
GN=BYI23_B007830 PE=4 SV=1 ; EVALUE=5e-76 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I5CWS1|I5CWS1_9BURK ;
ALN/Q_length_ratio=0.928 ; DESCRIPTION=RND efflux system
membrane fusion protein OS=Burkholderia terrae BS001
GN=WQE_14956 PE=4 SV=1 ; EVALUE=6e-76 ;
Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A060PCQ6|A0A060PCQ6_9BURK ;
ALN/Q_length_ratio=0.913 ; DESCRIPTION=Efflux transporter,
RND family, MFP subunit OS=Burkholderia sp. RPE67
GN=BRPE67_BCDS11800 PE=4 SV=1 ; EVALUE=6e-76 ;
Q/S_length_ratio=1.017"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I2IDV7|I2IDV7_9BURK ;
ALN/Q_length_ratio=0.807 ; DESCRIPTION=RND family efflux
transporter, MFP subunit OS=Burkholderia sp. Ch1-1
GN=BCh11DRAFT_04334 PE=4 SV=1 ; EVALUE=9e-76 ;
Q/S_length_ratio=0.887"
/note="Pfam_scan:hit_1 (74..394); Pfam:PF12700.2:HlyD_2;
Pfam_type:Family;HMM_aln_Length:316; HMM_Length:328;
EVALUE:4.2e-32; BITSCORE: 111.6"
/note="GO_domain:GO:0055085"
/note="GO_domain:GO:0005575"
BEGIN
1 MSVTPSAHSA HHEGPEAAPA RPSFFRLAFL AVLVLATLGA LGVAGVRARN KQQTDRTETA
61 EAARTDRPRV LTVTAERAPA RVEQVLPGTA SPFRETAVYA RTSGYLRRWL VDKGDTVSEG
121 QLLAEIETPE VNAQLLQARA AVAEATATRD RNRASAELAR LNLVRVRQTF ETGVGSRQEM
181 DEADAALKVA EATIRLSEAN IRAGEANVKR LEDLQQFQKV VAPFSGVITA RNYDPGALVV
241 ADSSSGPEMF HISQTETLRV QVDVPQTFAT SVHVGQPAPV SRREEPGREY KGAVGRTTNA
301 VNVQTRTLRV EVDVPNKDHA LLPGMYLQVK FHLDAPAKVI RVPGAAVVTR AEGTKVAVVE
361 SNGRIGYRTV KVGRDYGTIV EVTEGLTGGE KLVVRPGDDL AEGTEVDPVT ATER
//