LOCUS VTR95013.1 749 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana selenocysteine-specific translation
elongation factor : Selenocysteine-specific elongation
factor OS=uncultured planctomycete GN=HGMM_F37F03C06 PE=
4 SV=1: GTP_EFTU: GTP_EFTU_D2: SelB-wing_3 protein.
ACCESSION LR593886-4314
PROTEIN_ID VTR95013.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_27010"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SJP7|H5SJP7_9BACT ;
ALN/Q_length_ratio=0.618 ;
DESCRIPTION=Selenocysteine-specific elongation factor
OS=uncultured planctomycete GN=HGMM_F37F03C06 PE=4 SV=1 ;
EVALUE=1e-168 ; Q/S_length_ratio=1.137"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8QWZ3|E8QWZ3_ISOPI ;
ALN/Q_length_ratio=0.636 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630
/ IS1B) GN=Isop_3475 PE=4 SV=1 ; EVALUE=3e-81 ;
Q/S_length_ratio=1.125"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|E1QKM3|E1QKM3_DESB2 ;
ALN/Q_length_ratio=0.603 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Desulfarculus baarsii (strain ATCC 33931 / DSM
2075 / VKM B-1802 / 2st14) GN=Deba_2879 PE=4 SV=1 ;
EVALUE=4e-68 ; Q/S_length_ratio=1.181"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|I4CD38|I4CD38_DESTA ;
ALN/Q_length_ratio=0.601 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor SelB OS=Desulfomonile tiedjei (strain ATCC 49306 /
DSM 6799 / DCB-1) GN=Desti_4865 PE=4 SV=1 ; EVALUE=2e-67 ;
Q/S_length_ratio=1.168"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|S7TGQ2|S7TGQ2_9DELT ;
ALN/Q_length_ratio=0.618 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Desulfovibrio alkalitolerans DSM 16529
GN=dsat_1869 PE=4 SV=1 ; EVALUE=2e-66 ;
Q/S_length_ratio=1.181"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F8ADE4|F8ADE4_THEID ;
ALN/Q_length_ratio=0.609 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Thermodesulfatator indicus (strain DSM 15286 /
JCM 11887 / CIR29812) GN=Thein_2111 PE=4 SV=1 ;
EVALUE=1e-63 ; Q/S_length_ratio=1.165"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A059X2S8|A0A059X2S8_9BACT ;
ALN/Q_length_ratio=0.224 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor (Fragment) OS=uncultured bacterium PE=4 SV=1 ;
EVALUE=3e-63 ; Q/S_length_ratio=3.550"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E6VTJ3|E6VTJ3_DESAO ;
ALN/Q_length_ratio=0.606 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Desulfovibrio aespoeensis (strain ATCC 700646 /
DSM 10631 / Aspo-2) GN=Daes_1155 PE=4 SV=1 ; EVALUE=8e-63
; Q/S_length_ratio=1.170"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A096BH14|A0A096BH14_9CLOT ;
ALN/Q_length_ratio=0.606 ; DESCRIPTION=Translation
elongation factor OS=Caloranaerobacter azorensis H53214
GN=Y919_07645 PE=4 SV=1 ; EVALUE=5e-62 ;
Q/S_length_ratio=1.180"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|I3IQR0|I3IQR0_9PLAN ;
ALN/Q_length_ratio=0.611 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=planctomycete KSU-1 GN=KSU1_D0746 PE=4 SV=1 ;
EVALUE=8e-62 ; Q/S_length_ratio=1.168"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|C8X0V7|C8X0V7_DESRD ;
ALN/Q_length_ratio=0.611 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Desulfohalobium retbaense (strain DSM 5692)
GN=Dret_0762 PE=4 SV=1 ; EVALUE=1e-61 ;
Q/S_length_ratio=1.181"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F3YTQ4|F3YTQ4_DESAF ;
ALN/Q_length_ratio=0.609 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Desulfovibrio africanus str. Walvis Bay
GN=Desaf_0072 PE=4 SV=1 ; EVALUE=2e-60 ;
Q/S_length_ratio=1.181"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F6B705|F6B705_DESCC ;
ALN/Q_length_ratio=0.610 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Desulfotomaculum carboxydivorans (strain DSM
14880 / VKM B-2319 / CO-1-SRB) GN=Desca_1577 PE=4 SV=1 ;
EVALUE=3e-60 ; Q/S_length_ratio=1.172"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D6SST7|D6SST7_9DELT ;
ALN/Q_length_ratio=0.609 ;
DESCRIPTION=Selenocysteine-specific translation elongation
factor OS=Desulfonatronospira thiodismutans ASO3-1
GN=Dthio_PD1092 PE=4 SV=1 ; EVALUE=3e-60 ;
Q/S_length_ratio=1.180"
/note="BLAST_uniprot:hit_15 ; ACCESSION=Q46497 ;
ALN/Q_length_ratio=0.222 ;
DESCRIPTION=Selenocysteine-specific elongation factor
OS=Desulfomicrobium baculatum GN=selB PE=3 SV=1 ;
EVALUE=4e-60 ; Q/S_length_ratio=1.181"
/note="Pfam_scan:hit_1 (2..169); Pfam:PF00009.22:GTP_EFTU;
Pfam_type:Domain;HMM_aln_Length:179; HMM_Length:188;
EVALUE:2.8e-36; BITSCORE: 124.7"
/note="Pfam_scan:hit_2 (298..368);
Pfam:PF03144.20:GTP_EFTU_D2;
Pfam_type:Domain;HMM_aln_Length:72; HMM_Length:74;
EVALUE:1.8e-08; BITSCORE: 34.3"
/note="Pfam_scan:hit_3 (694..743);
Pfam:PF09107.6:SelB-wing_3;
Pfam_type:Domain;HMM_aln_Length:44; HMM_Length:50;
EVALUE:1.8e-16; BITSCORE: 59.2"
/note="GO_domain:GO:0003924"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008135"
/note="GO_domain:GO:0005840"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MPRDLILGTA GHIDHGKTSL VKVLTGIDCD RLPEEKARGI TIDIGFANLD LGDVRLGIVD
61 VPGHERFVKN MLAGATGIDL ALLVVAADDS VMPQTREHLE ILKLLGIRNG LIALTKADLV
121 DETTRDVVGL ELRELVRGSF LEDAPIIPTS AHTGLGITEL KDALREMCLR VGSEEPNPLT
181 PFPKKEGGTE PKTVLSPSPC SGPREAPLTG PESKQGGVGE GLQPQPTPPS PLPEGKGEQA
241 RDPAVFEATS ADNSFSPFPS GRGDGGVGSS PPSANAHRGG SSWFRLPIDR SFVVQGHGTV
301 VTGSVVSGSI AVGDELEWHR GDGTTDLVRV RGLNNHGRPA TEVHRGQRAA VNLAGVPHEQ
361 VRRGQELARP DYLLPSKVVT VRLFASAEGR HGIKHRLPVR LHVGTSEVMA TVSLLDCDTI
421 DPGQWGLAQL FLSEPVTTVW GQPFVLRDSS AEHTLGGGQV VQPTAAKVRR RHIEAIEQIE
481 KLWSDELQTR ALAVAWFAGT QGFEPDDLVR SAGVEPNQIE GLVSQLTTSG KLTELAFASN
541 RRLLIHTERV TQLEARVLDT LGTMHAENPL MTTHDRQKVL ARLDFVGDEQ LLQAIADRLL
601 RTKKVVGDTR RIARADFKPK LSANQRKLKD KIVEAHVSAG FAPPEPKEFA NQAGGNATAL
661 KDIFEVACAE GFLVRVTDEI YLSAKAETEM RRRVTQRLQT GPGATVAEIR DLLGTTRKFA
721 VPVCEYLDRV GLTKRAGDLR VLAEPAATG
//