LOCUS VTR94995.1 243 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Xylose isomerase domain protein TIM
barrel OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068
/ ICPB 4128) GN=Psta_1524 PE=4 SV=1: AP_endonuc_2 protein.
ACCESSION LR593886-4296
PROTEIN_ID VTR94995.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_27190"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2QXL4|D2QXL4_PIRSD ;
ALN/Q_length_ratio=1.025 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_1524 PE=4 SV=1
; EVALUE=5e-91 ; Q/S_length_ratio=0.719"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0DP45|L0DP45_SINAD ;
ALN/Q_length_ratio=0.996 ; DESCRIPTION=Putative
heme-binding domain-containing protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_6971 PE=4 SV=1 ; EVALUE=2e-85 ;
Q/S_length_ratio=0.181"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B4CTX8|B4CTX8_9BACT ;
ALN/Q_length_ratio=1.021 ; DESCRIPTION=Pyrrolo-quinoline
quinone OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_0141 PE=4 SV=1 ; EVALUE=1e-77 ;
Q/S_length_ratio=0.246"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B9XPQ5|B9XPQ5_PEDPL ;
ALN/Q_length_ratio=1.021 ; DESCRIPTION=Pyrrolo-quinoline
quinone OS=Pedosphaera parvula (strain Ellin514)
GN=Cflav_PD1378 PE=4 SV=1 ; EVALUE=5e-70 ;
Q/S_length_ratio=0.241"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|C6VRJ5|C6VRJ5_DYAFD ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Dyadobacter fermentans
(strain ATCC 700827 / DSM 18053 / NS114) GN=Dfer_1452 PE=4
SV=1 ; EVALUE=9e-58 ; Q/S_length_ratio=0.818"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M2BAI1|M2BAI1_9PLAN ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula europaea 6C
GN=RE6C_00599 PE=4 SV=1 ; EVALUE=1e-57 ;
Q/S_length_ratio=0.802"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B4D471|B4D471_9BACT ;
ALN/Q_length_ratio=1.012 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Chthoniobacter flavus
Ellin428 GN=CfE428DRAFT_3709 PE=4 SV=1 ; EVALUE=3e-56 ;
Q/S_length_ratio=0.802"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F4KTS4|F4KTS4_HALH1 ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Haliscomenobacter hydrossis
(strain ATCC 27775 / DSM 1100 / LMG 10767 / O)
GN=Halhy_0155 PE=4 SV=1 ; EVALUE=1e-55 ;
Q/S_length_ratio=0.865"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F2AMK0|F2AMK0_RHOBT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula baltica WH47
GN=RBWH47_05514 PE=4 SV=1 ; EVALUE=4e-55 ;
Q/S_length_ratio=0.728"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5CX59|K5CX59_RHOBT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula baltica SH28
GN=RBSH_06009 PE=4 SV=1 ; EVALUE=1e-54 ;
Q/S_length_ratio=0.728"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|L7CGA6|L7CGA6_RHOBT ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Uncharacterized
protein OS=Rhodopirellula baltica SWK14 GN=RBSWK_02874
PE=4 SV=1 ; EVALUE=2e-54 ; Q/S_length_ratio=0.728"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5SMB4|M5SMB4_9PLAN ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Rhodopirellula europaea SH398
GN=RESH_02101 PE=4 SV=1 ; EVALUE=6e-54 ;
Q/S_length_ratio=0.802"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q7UZA0|Q7UZA0_RHOBA ;
ALN/Q_length_ratio=0.918 ; DESCRIPTION=Putative
uncharacterized protein OS=Rhodopirellula baltica (strain
SH1) GN=RB93 PE=4 SV=1 ; EVALUE=2e-53 ;
Q/S_length_ratio=0.752"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5RRP5|M5RRP5_9PLAN ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Putative
heme-binding region domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_01108 PE=4 SV=1 ; EVALUE=4e-49 ;
Q/S_length_ratio=0.160"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B5JPJ7|B5JPJ7_9BACT ;
ALN/Q_length_ratio=0.967 ; DESCRIPTION=AP endonuclease,
family 2 OS=Verrucomicrobiae bacterium DG1235
GN=VDG1235_4024 PE=4 SV=1 ; EVALUE=1e-45 ;
Q/S_length_ratio=0.838"
/note="Pfam_scan:hit_1 (1..183);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:208; HMM_Length:213;
EVALUE:4.3e-14; BITSCORE: 52.3"
BEGIN
1 MLKKIGFKNY AYDWRAEHLP TFDEEVGLLK KAKIELTAVW FPANLGPDAQ KLLEVIKKHD
61 IKTQLWVTMG DPAGKDQVAK VESAVKVLKP IAEEAAKCGC KLALYNHGGW FGEPENQVAI
121 IDALKLKNVG IVYNLHHGHD HFDRFPALLK LMKPHLFALN INGSTKGGDK VGKKILPLGT
181 GELDLTVLRD IRDSGYSGPI GILGHTQDDA AERLADNLDG LGWLRRELAG KEPGPRPTYR
241 TWK
//