LOCUS VTR94929.1 312 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rad52 22 double-strand break repair
protein : Uncharacterized protein OS=uncultured bacterium
GN=ACD_20C00398G0011 PE=4 SV=1: Rad52_Rad22 protein.
ACCESSION LR593886-4230
PROTEIN_ID VTR94929.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_27850"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|K2DWL7|K2DWL7_9BACT ;
ALN/Q_length_ratio=0.474 ; DESCRIPTION=Uncharacterized
protein OS=uncultured bacterium GN=ACD_20C00398G0011 PE=4
SV=1 ; EVALUE=5e-39 ; Q/S_length_ratio=1.472"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A0A2WQV3|A0A0A2WQV3_THEFI ;
ALN/Q_length_ratio=0.449 ; DESCRIPTION=Putative
DNA-binding protein Erf OS=Thermus filiformis
GN=THFILI_CONTIG250g01738 PE=4 SV=1 ; EVALUE=3e-32 ;
Q/S_length_ratio=1.522"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F6DDA8|F6DDA8_THETG ;
ALN/Q_length_ratio=0.468 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Thermus thermophilus
(strain SG0.5JP17-16) GN=Ththe16_0304 PE=4 SV=1 ;
EVALUE=5e-32 ; Q/S_length_ratio=1.472"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|H7GEA3|H7GEA3_9DEIN ;
ALN/Q_length_ratio=0.468 ; DESCRIPTION=Uncharacterized
protein OS=Thermus sp. RL GN=RLTM_01965 PE=4 SV=1 ;
EVALUE=5e-32 ; Q/S_length_ratio=1.472"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q5SM62|Q5SM62_THET8 ;
ALN/Q_length_ratio=0.468 ; DESCRIPTION=Uncharacterized
protein OS=Thermus thermophilus (strain HB8 / ATCC 27634 /
DSM 579) GN=TTHA0081 PE=4 SV=1 ; EVALUE=5e-32 ;
Q/S_length_ratio=1.472"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H9ZTJ1|H9ZTJ1_THETH ;
ALN/Q_length_ratio=0.468 ; DESCRIPTION=Uncharacterized
protein OS=Thermus thermophilus JL-18 GN=TtJL18_1783 PE=4
SV=1 ; EVALUE=5e-32 ; Q/S_length_ratio=1.486"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q72GC5|Q72GC5_THET2 ;
ALN/Q_length_ratio=0.468 ; DESCRIPTION=Hypothetical
conserved protein OS=Thermus thermophilus (strain HB27 /
ATCC BAA-163 / DSM 7039) GN=TT_C1923 PE=4 SV=1 ;
EVALUE=5e-32 ; Q/S_length_ratio=1.472"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|E8PM85|E8PM85_THESS ;
ALN/Q_length_ratio=0.471 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Thermus scotoductus
(strain ATCC 700910 / SA-01) GN=TSC_c06080 PE=4 SV=1 ;
EVALUE=2e-31 ; Q/S_length_ratio=1.458"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|B7A856|B7A856_THEAQ ;
ALN/Q_length_ratio=0.497 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Thermus aquaticus
Y51MC23 GN=TaqDRAFT_4252 PE=4 SV=1 ; EVALUE=2e-31 ;
Q/S_length_ratio=1.472"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|W2U238|W2U238_9DEIN ;
ALN/Q_length_ratio=0.471 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Thermus sp. NMX2.A1
GN=TNMX_09095 PE=4 SV=1 ; EVALUE=2e-31 ;
Q/S_length_ratio=1.458"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|G8NBB7|G8NBB7_9DEIN ;
ALN/Q_length_ratio=0.446 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Thermus sp.
CCB_US3_UF1 GN=TCCBUS3UF1_7590 PE=4 SV=1 ; EVALUE=1e-30 ;
Q/S_length_ratio=1.465"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|G2SIF3|G2SIF3_RHOMR ;
ALN/Q_length_ratio=0.513 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Rhodothermus marinus
SG0.5JP17-172 GN=Rhom172_2537 PE=4 SV=1 ; EVALUE=2e-30 ;
Q/S_length_ratio=1.835"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D0MFE7|D0MFE7_RHOM4 ;
ALN/Q_length_ratio=0.465 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=Rmar_2527 PE=4
SV=1 ; EVALUE=4e-30 ; Q/S_length_ratio=1.835"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|F2NL70|F2NL70_MARHT ;
ALN/Q_length_ratio=0.410 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Marinithermus
hydrothermalis (strain DSM 14884 / JCM 11576 / T1)
GN=Marky_0723 PE=4 SV=1 ; EVALUE=5e-30 ;
Q/S_length_ratio=1.552"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E8PL03|E8PL03_THESS ;
ALN/Q_length_ratio=0.385 ; DESCRIPTION=Rad52/22
double-strand break repair protein OS=Thermus scotoductus
(strain ATCC 700910 / SA-01) GN=TSC_c16120 PE=4 SV=1 ;
EVALUE=7e-30 ; Q/S_length_ratio=2.000"
/note="Pfam_scan:hit_1 (12..148);
Pfam:PF04098.10:Rad52_Rad22;
Pfam_type:Family;HMM_aln_Length:139; HMM_Length:154;
EVALUE:3.8e-12; BITSCORE: 46.1"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0006950"
BEGIN
1 MSIETEMSRS PQMLTLTSEL AAPFNPRDVK FKPQMVKNNR CLAMAYIDAR LIQDRLDEVL
61 GVENWEDAYK ILPDGSVMCR LRCKLGDRWI TKTDVGSPSE QPDMGDRLKA AFSDALKRAA
121 VKFGIGRYLY RLPAQWVEYD PMKKQIVQPP QLPAFAIPKT KPQASTKPAP SGFVATEPKK
181 ETTRADVSKI NEPAPANTKA PAAKTEAQKT DAPKTEALKP EPQKADPSKT ANLPSNGQEL
241 HRRLREYDAK LASQKLCSVG ALLAYVTQAG VKAGFTANMN EWTGPAIQLA VDAVREFDQA
301 SRQGKPEPRT AA
//