LOCUS       VTR94921.1               590 aa    PRT              BCT 03-FEB-2020
DEFINITION  Gemmata massiliana sigma-70 family rna polymerase sigma
            factor : RNA polymerase sigma factor, sigma-70 family
            OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
            18658 / VKM B-2454 / MOB10) GN=Sinac_2497 PE=4 SV=1: Sigma70_r2:
            Sigma70_r4_2: MORN_2: MORN_2: MORN_2 protein.
ACCESSION   LR593886-4222
PROTEIN_ID  VTR94921.1
SOURCE      Gemmata massiliana
  ORGANISM  Gemmata massiliana
            Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
            Gemmata.
REFERENCE   1
  AUTHORS   
  CONSRTM   Science for Life Laboratories
  JOURNAL   Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
            MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
            Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES             Qualifiers
     source          /organism="Gemmata massiliana"
                     /chromosome="1"
                     /isolate="Soil9"
                     /mol_type="genomic DNA"
                     /isolation_source="soil"
                     /db_xref="taxon:1210884"
     protein         /locus_tag="SOIL9_27930"
                     /note="BLAST_uniprot:hit_1 ;
                     ACCESSION=tr|L0DDR3|L0DDR3_SINAD ;
                     ALN/Q_length_ratio=0.537 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_2497 PE=4 SV=1 ; EVALUE=2e-50 ;
                     Q/S_length_ratio=0.535"
                     /note="BLAST_uniprot:hit_2 ;
                     ACCESSION=tr|L0DGG0|L0DGG0_SINAD ;
                     ALN/Q_length_ratio=0.427 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4264 PE=4 SV=1 ; EVALUE=5e-46 ;
                     Q/S_length_ratio=1.392"
                     /note="BLAST_uniprot:hit_3 ;
                     ACCESSION=tr|L0DFV7|L0DFV7_SINAD ;
                     ALN/Q_length_ratio=0.325 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_3442 PE=4 SV=1 ; EVALUE=4e-42 ;
                     Q/S_length_ratio=0.481"
                     /note="BLAST_uniprot:hit_4 ;
                     ACCESSION=tr|L0D6V6|L0D6V6_SINAD ;
                     ALN/Q_length_ratio=0.315 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0102 PE=4 SV=1 ; EVALUE=2e-41 ;
                     Q/S_length_ratio=1.054"
                     /note="BLAST_uniprot:hit_5 ;
                     ACCESSION=tr|L0DLJ0|L0DLJ0_SINAD ;
                     ALN/Q_length_ratio=0.317 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_5383 PE=4 SV=1 ; EVALUE=1e-40 ;
                     Q/S_length_ratio=1.850"
                     /note="BLAST_uniprot:hit_6 ;
                     ACCESSION=tr|L0DM90|L0DM90_SINAD ;
                     ALN/Q_length_ratio=0.346 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_6419 PE=4 SV=1 ; EVALUE=3e-39 ;
                     Q/S_length_ratio=0.961"
                     /note="BLAST_uniprot:hit_7 ;
                     ACCESSION=tr|L0D9E1|L0D9E1_SINAD ;
                     ALN/Q_length_ratio=0.364 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0869 PE=4 SV=1 ; EVALUE=9e-39 ;
                     Q/S_length_ratio=1.224"
                     /note="BLAST_uniprot:hit_8 ;
                     ACCESSION=tr|L0DHB8|L0DHB8_SINAD ;
                     ALN/Q_length_ratio=0.441 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_3834 PE=4 SV=1 ; EVALUE=2e-38 ;
                     Q/S_length_ratio=1.065"
                     /note="BLAST_uniprot:hit_9 ;
                     ACCESSION=tr|L0D7L2|L0D7L2_SINAD ;
                     ALN/Q_length_ratio=0.458 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_0185 PE=4 SV=1 ; EVALUE=5e-38 ;
                     Q/S_length_ratio=1.178"
                     /note="BLAST_uniprot:hit_10 ;
                     ACCESSION=tr|L0DQA3|L0DQA3_SINAD ;
                     ALN/Q_length_ratio=0.368 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_6979 PE=4 SV=1 ; EVALUE=1e-37 ;
                     Q/S_length_ratio=1.326"
                     /note="BLAST_uniprot:hit_12 ;
                     ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ;
                     ALN/Q_length_ratio=0.305 ; DESCRIPTION=Uncultured
                     bacterium genome assembly Metasoil_fosmids_resub
                     OS=uncultured bacterium PE=4 SV=1 ; EVALUE=2e-37 ;
                     Q/S_length_ratio=0.509"
                     /note="BLAST_uniprot:hit_13 ;
                     ACCESSION=tr|L0DKD8|L0DKD8_SINAD ;
                     ALN/Q_length_ratio=0.478 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_4965 PE=4 SV=1 ; EVALUE=2e-37 ;
                     Q/S_length_ratio=0.661"
                     /note="BLAST_uniprot:hit_11 ;
                     ACCESSION=tr|L0DQ81|L0DQ81_SINAD ;
                     ALN/Q_length_ratio=0.473 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_7511 PE=4 SV=1 ; EVALUE=2e-37 ;
                     Q/S_length_ratio=0.683"
                     /note="BLAST_uniprot:hit_14 ;
                     ACCESSION=tr|L0DHG5|L0DHG5_SINAD ;
                     ALN/Q_length_ratio=0.375 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_3888 PE=4 SV=1 ; EVALUE=3e-37 ;
                     Q/S_length_ratio=0.840"
                     /note="BLAST_uniprot:hit_15 ;
                     ACCESSION=tr|L0DR85|L0DR85_SINAD ;
                     ALN/Q_length_ratio=0.388 ; DESCRIPTION=RNA polymerase
                     sigma factor, sigma-70 family OS=Singulisphaera acidiphila
                     (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
                     GN=Sinac_7453 PE=4 SV=1 ; EVALUE=3e-36 ;
                     Q/S_length_ratio=0.988"
                     /note="Pfam_scan:hit_1 (43..113);
                     Pfam:PF04542.9:Sigma70_r2;
                     Pfam_type:Domain;HMM_aln_Length:63; HMM_Length:71;
                     EVALUE:5.1e-09; BITSCORE: 35.6"
                     /note="Pfam_scan:hit_2 (136..189);
                     Pfam:PF08281.7:Sigma70_r4_2;
                     Pfam_type:Domain;HMM_aln_Length:53; HMM_Length:54;
                     EVALUE:3.4e-09; BITSCORE: 36.0"
                     /note="Pfam_scan:hit_3 (492..513); Pfam:PF07661.8:MORN_2;
                     Pfam_type:Repeat;HMM_aln_Length:20; HMM_Length:22;
                     EVALUE:0.4; BITSCORE: 10.8"
                     /note="Pfam_scan:hit_4 (516..537); Pfam:PF07661.8:MORN_2;
                     Pfam_type:Repeat;HMM_aln_Length:20; HMM_Length:22;
                     EVALUE:0.0017; BITSCORE: 18.1"
                     /note="Pfam_scan:hit_5 (540..561); Pfam:PF07661.8:MORN_2;
                     Pfam_type:Repeat;HMM_aln_Length:20; HMM_Length:22;
                     EVALUE:1.1; BITSCORE: 9.5"
                     /note="GO_domain:GO:0003677"
                     /note="GO_domain:GO:0001071"
                     /note="GO_domain:GO:0000988"
                     /note="GO_domain:GO:0034641"
                     /note="GO_domain:GO:0009058"
                     /note="GO_domain:GO:0043234"
                     /note="GO_domain:GO:0005622"
BEGIN
        1 MATRAADPLL QSVRALVAGR GESDQELLDR FVRQHDEAAF ATLVERHGPM VLGVCRRGLR
       61 DEHAAEDTFQ ATFLVLARNA GSIHERRALS SWLHGVALRL VRRARVTFAR AQRDKARIAP
      121 EAPREPAVEA SWSEVRQILD DELKRLPENY RLPLVLCALE GRSREEAAAE MGCTPSQLKG
      181 LLERGRERLR ARLIRRGLAP SSIGALLLTE EALAVPVPPL LAIATRRITR GLSATTHPTD
      241 CELPLPVRSL IARGLSMIGA KRLGLVLVFA VVATAVGLSG FDRPETAPAP HAVADRSQKS
      301 APATNKRTDL LDDEAAVAAH IKALHDPDST TREKAATALR RIVAKYPSGT VYLPSKDGGE
      361 AEWKAKVDRI EPGSDKSEML KILPPLTPGD SGGGLVEGDS HYGSYRLDYH WIVRICYRDT
      421 GKMIRRPELM KNALRVHVAP PKDFTGTWTT WHINGQKSYD YQYKNGKSDG VFTSYHDNGA
      481 KNHEQHYTAD VAHGTGTGWF PDGKVNYTIQ YRNGKLHGTW THWYANGNKH SEANYADGEY
      541 HGRQTNWHEN GQLGSVTDYK NGVKHGVEAS WNENGIPHYD RLYLNGKIVN
//