LOCUS VTR94907.1 533 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana fis family transcriptional regulator
: Sigma 54-dependent transcriptional activator OS=Planctomyces
maris DSM 8797 GN=PM8797T_28319 PE=4 SV=1: Sigma54_activat:
HTH_8 protein.
ACCESSION LR593886-4208
PROTEIN_ID VTR94907.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_28070"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A6BZ15|A6BZ15_9PLAN ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Sigma 54-dependent
transcriptional activator OS=Planctomyces maris DSM 8797
GN=PM8797T_28319 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.987"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|C0Q9L2|C0Q9L2_DESAH ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Sigma-54 dependent
transcriptional regulator OS=Desulfobacterium
autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2)
GN=HRM2_14670 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|B7RYB0|B7RYB0_9GAMM ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Sigma-54
interaction domain family protein OS=marine gamma
proteobacterium HTCC2148 GN=GPB2148_1465 PE=4 SV=1 ;
EVALUE=1e-126 ; Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|S0G423|S0G423_9DELT ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Putative sigma54
specific transcriptional regulator OS=Desulfotignum
phosphitoxidans DSM 13687 GN=Dpo_6c02510 PE=4 SV=1 ;
EVALUE=1e-122 ; Q/S_length_ratio=1.062"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|I5AZU6|I5AZU6_9DELT ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Sigma-54
interacting regulator OS=Desulfobacter postgatei 2ac9
GN=DespoDRAFT_00771 PE=4 SV=1 ; EVALUE=1e-122 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A011QHS1|A0A011QHS1_9PROT ;
ALN/Q_length_ratio=0.931 ; DESCRIPTION=Quorum-sensing
regulator protein F OS=Candidatus Accumulibacter sp. BA-92
GN=qseF_2 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F2NF89|F2NF89_DESAR ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Desulfobacca
acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2)
GN=Desac_0765 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=1.053"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|N6ZSX2|N6ZSX2_9RHOO ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Sigma-54 factor
interaction domain-containing protein OS=Thauera
phenylacetica B4P GN=C667_08103 PE=4 SV=1 ; EVALUE=1e-119
; Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U3QL45|U3QL45_RALPI ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Fis family
transcriptional regulator OS=Ralstonia pickettii DTP0602
GN=N234_17190 PE=4 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=1.070"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|X7E6D1|X7E6D1_9GAMM ;
ALN/Q_length_ratio=0.919 ; DESCRIPTION=ATPase AAA
OS=Marinomonas ushuaiensis DSM 15871 GN=MUS1_09505 PE=4
SV=1 ; EVALUE=1e-116 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D8F0C4|D8F0C4_9DELT ;
ALN/Q_length_ratio=0.867 ; DESCRIPTION=Sigma-54
interaction domain protein OS=delta proteobacterium NaphS2
GN=NPH_3593 PE=4 SV=1 ; EVALUE=1e-116 ;
Q/S_length_ratio=1.154"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A011PFL3|A0A011PFL3_9PROT ;
ALN/Q_length_ratio=0.927 ; DESCRIPTION=Quorum-sensing
regulator protein F OS=Candidatus Accumulibacter sp. SK-12
GN=qseF_2 PE=4 SV=1 ; EVALUE=1e-116 ;
Q/S_length_ratio=1.060"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A5GB16|A5GB16_GEOUR ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Sigma-54 specific
transcriptional regulator, Fis family OS=Geobacter
uraniireducens (strain Rf4) GN=Gura_1024 PE=4 SV=1 ;
EVALUE=1e-115 ; Q/S_length_ratio=1.075"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A6W082|A6W082_MARMS ;
ALN/Q_length_ratio=0.919 ; DESCRIPTION=Sigma54 specific
transcriptional regulator, Fis family OS=Marinomonas sp.
(strain MWYL1) GN=Mmwyl1_3203 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A8ZY56|A8ZY56_DESOH ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=Putative sigma54
specific transcriptional regulator OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=Dole_1257 PE=4 SV=1
; EVALUE=1e-114 ; Q/S_length_ratio=1.060"
/note="Pfam_scan:hit_1 (202..376);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:165; HMM_Length:168;
EVALUE:1.6e-63; BITSCORE: 213.2"
/note="Pfam_scan:hit_2 (484..526); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:28; HMM_Length:42;
EVALUE:4.1e-05; BITSCORE: 23.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MVLLMATRRV LVSWIGYADF RALAATLPPD QQAEVLRGLN PPTPLIGQAG PLKTLLDHES
61 FAEVHLLTSH PGPRNRLYTR WVGGSPVLHP IKVNNPTDYV EIFQLVDTEL ASIARLPRDA
121 DEELCIHLSP GTPTMTAIWV LLGKSKYQPA TFYQTHDGRA WVTTIPFDLV VDYVPQVLRD
181 ADARLQLLAA QSPRDVQGFQ DVAGDSHGIR VAVGRARRAA RRGVSVLILG ESGTGKELFA
241 RAVHDASPRR EGPFVAINCA ALSRELLESE LFGHKKGAFT GADRDREGAF AEADGGTLFL
301 DEIGECDPAM QAKLLRVLQP PDGSPCQRVF CRVGDSRPRT SDVRIVAATN RDLLGCVAQN
361 QFREDLYYRL ATITIKLPPL RERRGDVGAI AERLLGRINR DFAQQEPGFR PKRLSPSALG
421 YVKGHSWPGN VRQLYNTLVQ AAVMSDGDVI DRRDLDDAVA EVPGQAPADL LEVPLGGRFS
481 LERHLEEIQR HYLRRALAEA DGVQRRAAEL LGYRNYQTLA AQLERLGIKK DDH
//