LOCUS VTR94896.1 351 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana RNA ligase, DRB0094 family OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008
/ 290) GN=Plim_0508 PE=4 SV=1: RNA_ligase protein.
ACCESSION LR593886-4197
PROTEIN_ID VTR94896.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_28180"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SQA4|D5SQA4_PLAL2 ;
ALN/Q_length_ratio=1.006 ; DESCRIPTION=RNA ligase, DRB0094
family OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_0508 PE=4 SV=1 ;
EVALUE=1e-139 ; Q/S_length_ratio=0.959"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A098WCU6|A0A098WCU6_9CYAN ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=2'-5' RNA ligase
OS=Tolypothrix bouteillei VB521301 GN=DA73_81675 PE=4 SV=1
; EVALUE=1e-113 ; Q/S_length_ratio=1.064"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|C7PHH4|C7PHH4_CHIPD ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=RNA ligase, DRB0094
family OS=Chitinophaga pinensis (strain ATCC 43595 / DSM
2588 / NCIB 11800 / UQM 2034) GN=Cpin_2419 PE=4 SV=1 ;
EVALUE=4e-82 ; Q/S_length_ratio=1.048"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F4KZV8|F4KZV8_HALH1 ;
ALN/Q_length_ratio=0.943 ; DESCRIPTION=RNA ligase, DRB0094
family OS=Haliscomenobacter hydrossis (strain ATCC 27775 /
DSM 1100 / LMG 10767 / O) GN=Halhy_3676 PE=4 SV=1 ;
EVALUE=1e-78 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K1WXW1|K1WXW1_9BACT ;
ALN/Q_length_ratio=0.932 ; DESCRIPTION=RNA ligase, DRB0094
family OS=uncultured bacterium GN=ACD_85C00001G0017 PE=4
SV=1 ; EVALUE=1e-78 ; Q/S_length_ratio=1.070"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|U2SP23|U2SP23_9DELT ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=Uncharacterized
protein OS=Myxococcus sp. (contaminant ex DSM 436)
GN=A176_05122 PE=4 SV=1 ; EVALUE=3e-70 ;
Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0YSK6|A0YSK6_LYNSP ;
ALN/Q_length_ratio=0.826 ; DESCRIPTION=Uncharacterized
protein OS=Lyngbya sp. (strain PCC 8106) GN=L8106_22501
PE=4 SV=1 ; EVALUE=3e-67 ; Q/S_length_ratio=1.198"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D1AND8|D1AND8_SEBTE ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=RNA ligase, DRB0094
family OS=Sebaldella termitidis (strain ATCC 33386 / NCTC
11300) GN=Sterm_2898 PE=4 SV=1 ; EVALUE=2e-66 ;
Q/S_length_ratio=1.045"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F8CKM9|F8CKM9_MYXFH ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=RNA ligase, DRB0094
family protein OS=Myxococcus fulvus (strain ATCC BAA-855 /
HW-1) GN=LILAB_35405 PE=4 SV=1 ; EVALUE=3e-66 ;
Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|E6LPL9|E6LPL9_9FIRM ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=Putative RNA
ligase, DRB0094 family OS=Lachnoanaerobaculum saburreum
DSM 3986 GN=HMPREF0381_1904 PE=4 SV=1 ; EVALUE=7e-66 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|S5MQ27|S5MQ27_9CAUD ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=Putative RNA ligase
OS=Sinorhizobium phage phiM12 GN=SmphiM12_303 PE=4 SV=1 ;
EVALUE=1e-65 ; Q/S_length_ratio=0.992"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|I0R7E9|I0R7E9_9FIRM ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=RNA ligase
OS=Lachnoanaerobaculum saburreum F0468 GN=HMPREF9970_2258
PE=4 SV=1 ; EVALUE=3e-65 ; Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|H1LUE3|H1LUE3_9FIRM ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=RNA ligase, DRB0094
family OS=Lachnospiraceae bacterium oral taxon 082 str.
F0431 GN=HMPREF9099_01077 PE=4 SV=1 ; EVALUE=6e-65 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L7UIU3|L7UIU3_MYXSD ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=RNA ligase, DRB0094
family protein OS=Myxococcus stipitatus (strain DSM 14675
/ JCM 12634 / Mx s8) GN=MYSTI_06179 PE=4 SV=1 ;
EVALUE=2e-64 ; Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K2A7N0|K2A7N0_9BACT ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=RNA ligase, DRB0094
family OS=uncultured bacterium GN=ACD_62C00080G0003 PE=4
SV=1 ; EVALUE=2e-63 ; Q/S_length_ratio=1.070"
/note="Pfam_scan:hit_1 (168..341);
Pfam:PF09414.5:RNA_ligase;
Pfam_type:Family;HMM_aln_Length:183; HMM_Length:186;
EVALUE:5.4e-15; BITSCORE: 55.6"
BEGIN
1 MRKLASIQTV NAAEPIPNAD AIEKIRVLGW WVVTKKGEFK PGDKVVYCEI DSLLPETADF
61 EFLRPNCFKP ARTDAAGAVV LPSGFRIKTI KLRGQVSQGI CFPLNILPAG APTDEDADVT
121 DALGVCKWEP PQTGASGRAR GSFPGFLPKT DETRVQVLEK VLERYQGVEF YLTEKLDGTS
181 FTAFIREGEF GVCSRNMLLD TTDPMSTLVG VAKRLNLEER LRALGAARGF EVAVQGEIIG
241 PGVQQNKYAL KEVALRVFNV FDVSAYRFLD HADVLTAIAE MGLEAVPQLG TLVLSHGVDE
301 LVALSEGMSV LNAKAQREGI VLRPLREVDD HYLGRLSFKA INPKFLLKYD E
//