LOCUS VTR94885.1 609 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna polymerase iii subunit gamma tau
: DNA polymerase III gamma and tau subunits OS=Blastopirellula
marina DSM 3645 GN=DSM3645_28667 PE=4 SV=1: DNA_pol3_delta2:
DNA_pol3_gamma3 protein.
ACCESSION LR593886-4186
PROTEIN_ID VTR94885.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_28290"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A3ZPF5|A3ZPF5_9PLAN ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=DNA polymerase III
gamma and tau subunits OS=Blastopirellula marina DSM 3645
GN=DSM3645_28667 PE=4 SV=1 ; EVALUE=1e-139 ;
Q/S_length_ratio=0.985"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|L0D8Y2|L0D8Y2_SINAD ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=DNA polymerase III,
subunit gamma/tau OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_1310 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F0SQB2|F0SQB2_PLABD ;
ALN/Q_length_ratio=0.874 ; DESCRIPTION=DNA polymerase III,
subunits gamma and tau OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_4720 PE=4 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=1.027"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8R2R0|E8R2R0_ISOPI ;
ALN/Q_length_ratio=0.611 ; DESCRIPTION=DNA polymerase III,
subunits gamma and tau OS=Isosphaera pallida (strain ATCC
43644 / DSM 9630 / IS1B) GN=Isop_2992 PE=4 SV=1 ;
EVALUE=1e-130 ; Q/S_length_ratio=0.920"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|K5E337|K5E337_RHOBT ;
ALN/Q_length_ratio=0.632 ; DESCRIPTION=DNA polymerase III
gamma and tau subunits OS=Rhodopirellula baltica SH28
GN=RBSH_04537 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=1.433"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M2B5Z6|M2B5Z6_9PLAN ;
ALN/Q_length_ratio=0.632 ; DESCRIPTION=DNA polymerase III,
subunits gamma and tau OS=Rhodopirellula europaea 6C
GN=RE6C_01695 PE=4 SV=1 ; EVALUE=1e-125 ;
Q/S_length_ratio=1.433"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|Q7UQ66|Q7UQ66_RHOBA ;
ALN/Q_length_ratio=1.057 ; DESCRIPTION=DNA polymerase III
gamma and tau subunits OS=Rhodopirellula baltica (strain
SH1) GN=dnaX PE=4 SV=1 ; EVALUE=1e-125 ;
Q/S_length_ratio=0.901"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5TTN2|M5TTN2_9PLAN ;
ALN/Q_length_ratio=0.635 ; DESCRIPTION=DNA polymerase III,
gamma and tau subunit OS=Rhodopirellula sallentina SM41
GN=RSSM_06121 PE=4 SV=1 ; EVALUE=1e-124 ;
Q/S_length_ratio=1.538"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A6CH16|A6CH16_9PLAN ;
ALN/Q_length_ratio=0.585 ; DESCRIPTION=DNA polymerase III
gamma and tau subunits (Fragment) OS=Planctomyces maris
DSM 8797 GN=PM8797T_30526 PE=4 SV=1 ; EVALUE=1e-124 ;
Q/S_length_ratio=1.258"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5RBD4|M5RBD4_9PLAN ;
ALN/Q_length_ratio=0.593 ; DESCRIPTION=DNA polymerase III,
subunits gamma and tau domain protein OS=Rhodopirellula
maiorica SM1 GN=RMSM_06392 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=1.034"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F2AVV6|F2AVV6_RHOBT ;
ALN/Q_length_ratio=0.617 ; DESCRIPTION=DNA polymerase III
gamma and tau subunits OS=Rhodopirellula baltica WH47
GN=RBWH47_04244 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=0.935"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|L7CDP9|L7CDP9_RHOBT ;
ALN/Q_length_ratio=0.617 ; DESCRIPTION=DNA polymerase III
subunit gamma/tau OS=Rhodopirellula baltica SWK14
GN=RBSWK_04263 PE=4 SV=1 ; EVALUE=1e-123 ;
Q/S_length_ratio=0.935"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D2R5L2|D2R5L2_PIRSD ;
ALN/Q_length_ratio=0.621 ; DESCRIPTION=DNA polymerase III,
subunits gamma and tau OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_2525 PE=4 SV=1 ;
EVALUE=1e-120 ; Q/S_length_ratio=0.852"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D5SRK5|D5SRK5_PLAL2 ;
ALN/Q_length_ratio=0.629 ; DESCRIPTION=DNA polymerase III,
subunits gamma and tau OS=Planctomyces limnophilus (strain
ATCC 43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_0692 PE=4
SV=1 ; EVALUE=1e-120 ; Q/S_length_ratio=0.893"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5T1R5|M5T1R5_9PLAN ;
ALN/Q_length_ratio=0.617 ; DESCRIPTION=DNA polymerase III
gamma and tau subunit OS=Rhodopirellula sp. SWK7
GN=RRSWK_04529 PE=4 SV=1 ; EVALUE=1e-118 ;
Q/S_length_ratio=0.920"
/note="Pfam_scan:hit_1 (36..197);
Pfam:PF13177.1:DNA_pol3_delta2;
Pfam_type:Domain;HMM_aln_Length:159; HMM_Length:162;
EVALUE:3.7e-45; BITSCORE: 153.4"
/note="Pfam_scan:hit_2 (250..392);
Pfam:PF12169.3:DNA_pol3_gamma3;
Pfam_type:Family;HMM_aln_Length:141; HMM_Length:143;
EVALUE:7e-20; BITSCORE: 71.2"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0005622"
/note="Enzyme_Code:EC:2.7.7.7"
BEGIN
1 MSKSKPISAP DPGADAPAYT VVARRYRPQQ FAELIGQEHV ANALVNALKS GRVAHAYLFT
61 GARGVGKTSA ARILAKALNC MKSERPTATP CDECDSCRAV MTGDDVDVLE IDGASNNKVE
121 EVRDLRQNVG FRPARGRYKI YIIDEVHMLS TSAFNALLKT LEEPPEHVKF ILATTEVQKI
181 PITILSRCQR FDFAHVGPAK IFDQLKRIVE REGHLADDDA LRLVARRAAG SMRDSQSLLD
241 QLLASAQGKL TTEQVSAVLG TAADDRVIEL ARAVIGGDAR AALDLIAAWV DRGLQIGELV
301 DQLVEYWRAL MLVSCGGPEV RELPVSPNQF EAVKTQSQSV SLDTILAGLE VLTATKARMR
361 GSAHTQVLLE MAVVRLCRLG DLRSLDQLVQ ALSQPGVQSA VVATGAGTPA PTRAPAAAVP
421 VAAEAAKKNG PLAGALTAKP AENGSPNNST STIPLSESTL QDVWNRFYRY AGERYPILAK
481 HLNSVSSYAI SAPNSLVIRF PSSYSESHDT CSAETGSLRL ADALKKVTGQ TIALRFERDR
541 APNSQPLVRE AQPSLASRGD VKQLLPSLPL FKKALDLFGA QIRQVDDGFN PFAAPPKEAE
601 TKEGTDEEG
//