LOCUS VTR94879.1 467 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana two sigma54 transcriptional fis family
: Two component, sigma54 specific, transcriptional regulator,
Fis family OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=Psta_1595 PE=4 SV=1: Response_reg:
Sigma54_activat: HTH_8 protein.
ACCESSION LR593886-4180
PROTEIN_ID VTR94879.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_28350"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2QY56|D2QY56_PIRSD ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_1595 PE=4 SV=1 ; EVALUE=1e-135 ;
Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|I3IPN0|I3IPN0_9PLAN ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Two-component
response regulator OS=planctomycete KSU-1 GN=KSU1_D0366
PE=4 SV=1 ; EVALUE=1e-131 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5U0T1|M5U0T1_9PLAN ;
ALN/Q_length_ratio=0.929 ; DESCRIPTION=Two component,
sigma54 specific, Fis family transcriptional regulator
OS=Rhodopirellula sallentina SM41 GN=RSSM_03502 PE=4 SV=1
; EVALUE=1e-128 ; Q/S_length_ratio=1.049"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|S4XNR7|S4XNR7_SORCE ;
ALN/Q_length_ratio=0.985 ; DESCRIPTION=Acetoacetate
metabolism regulatory protein AtoC OS=Sorangium cellulosum
So0157-2 GN=SCE1572_15335 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=0.973"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W4LZ97|W4LZ97_9DELT ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=Uncharacterized
protein OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_02610 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|F2NEN1|F2NEN1_DESAR ;
ALN/Q_length_ratio=0.966 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfobacca acetoxidans (strain ATCC 700848 / DSM
11109 / ASRB2) GN=Desac_0330 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|H1XS01|H1XS01_9BACT ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Caldithrix abyssi DSM 13497 GN=Calab_2887 PE=4 SV=1 ;
EVALUE=1e-127 ; Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F6CNR7|F6CNR7_DESK7 ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM
B-1805 / 17) GN=Desku_2572 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F0SHW7|F0SHW7_PLABD ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_3053 PE=4
SV=1 ; EVALUE=1e-127 ; Q/S_length_ratio=1.047"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|F8ABW9|F8ABW9_THEID ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Thermodesulfatator indicus (strain DSM 15286 / JCM
11887 / CIR29812) GN=Thein_1806 PE=4 SV=1 ; EVALUE=1e-126
; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F6B930|F6B930_DESCC ;
ALN/Q_length_ratio=0.946 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfotomaculum carboxydivorans (strain DSM 14880 /
VKM B-2319 / CO-1-SRB) GN=Desca_0801 PE=4 SV=1 ;
EVALUE=1e-126 ; Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0LPT2|A0LPT2_SYNFM ;
ALN/Q_length_ratio=0.968 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
GN=Sfum_3765 PE=4 SV=1 ; EVALUE=1e-126 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q317I6|Q317I6_DESAG ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfovibrio alaskensis (strain G20) GN=Dde_0109 PE=4
SV=1 ; EVALUE=1e-126 ; Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|C8WZM7|C8WZM7_DESRD ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Two component,
sigma54 specific, transcriptional regulator, Fis family
OS=Desulfohalobium retbaense (strain DSM 5692)
GN=Dret_0200 PE=4 SV=1 ; EVALUE=1e-126 ;
Q/S_length_ratio=1.040"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q1PZT5|Q1PZT5_9BACT ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=Strongly similar to
sigma 54 response regulatory protein OS=Candidatus
Kuenenia stuttgartiensis GN=kustd1856 PE=4 SV=1 ;
EVALUE=1e-126 ; Q/S_length_ratio=1.042"
/note="Pfam_scan:hit_1 (13..123);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:112;
EVALUE:1.8e-22; BITSCORE: 79.4"
/note="Pfam_scan:hit_2 (154..321);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:167; HMM_Length:168;
EVALUE:3.8e-67; BITSCORE: 224.9"
/note="Pfam_scan:hit_3 (419..460); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:39; HMM_Length:42;
EVALUE:1.2e-11; BITSCORE: 43.9"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0007165"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MIGTGDKKPR GHILVVDDEV ELMRALCESL TDEGFEVQGL SDPALAPDAL REHECDVLLS
61 DLMMPGTDGI QLLRKCLEID PHLVGVIMTG QGTIQTAVEA MKAGAFDYIL KPFRLQQVMP
121 VLDRALEVRR LRVENVRLRR FVQRLTFESE RYRIVGSSPA VRKIVQMIEK VAPTNAGVLV
181 RGPSGTGKEL IARALHGNSA RRDKPLVTVN CATLQESLLE SELFGHERGA FTGADRAKPG
241 LFEVAEGGTL FVDEVAEMAP ALQAKLLRVL EDGHYRRVGS TQEKRADVRV IAATNKPLEA
301 EQSAGRFRED LFFRLNVISI TLPPLKERRE DIPELIAHFL HTRQVGRGLM TVDPVARAAL
361 CSYDWPGNIR ELANVLERAQ ILAEGTTITP DDLPETVLAS RAAVPGTEPP PPVATSPDDL
421 DRMERHHVAD VLRRHGGNKV QAAKALGVSR RTLYRLIEKH RLAAESE
//