LOCUS VTR94870.1 381 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana radical sam domain-containing protein
: Radical SAM superfamily protein OS=Treponema sp. JC4
GN=MSI_23190 PE=4 SV=1: Radical_SAM: Fer4_12: SPASM protein.
ACCESSION LR593886-4171
PROTEIN_ID VTR94870.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_28440"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|I0X6E2|I0X6E2_9SPIO ;
ALN/Q_length_ratio=0.774 ; DESCRIPTION=Radical SAM
superfamily protein OS=Treponema sp. JC4 GN=MSI_23190 PE=4
SV=1 ; EVALUE=1e-46 ; Q/S_length_ratio=1.249"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A4WI01|A4WI01_PYRAR ;
ALN/Q_length_ratio=0.798 ; DESCRIPTION=Radical SAM domain
protein OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM
11321) GN=Pars_0419 PE=4 SV=1 ; EVALUE=3e-13 ;
Q/S_length_ratio=1.131"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F6CME7|F6CME7_DESK7 ;
ALN/Q_length_ratio=0.601 ; DESCRIPTION=Radical SAM domain
protein OS=Desulfotomaculum kuznetsovii (strain DSM 6115 /
VKM B-1805 / 17) GN=Desku_3171 PE=4 SV=1 ; EVALUE=5e-13 ;
Q/S_length_ratio=1.162"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q8ZZF5|Q8ZZF5_PYRAE ;
ALN/Q_length_ratio=0.827 ; DESCRIPTION=Metallo cofactor
biosynthesis protein, conjectural OS=Pyrobaculum
aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630
/ NBRC 100827) GN=PAE0289 PE=4 SV=1 ; EVALUE=7e-13 ;
Q/S_length_ratio=1.131"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0I6A9|L0I6A9_HALRX ;
ALN/Q_length_ratio=0.753 ; DESCRIPTION=Putative Fe-S
oxidoreductase OS=Halovivax ruber (strain DSM 18193 / JCM
13892 / XH-70) GN=Halru_0442 PE=4 SV=1 ; EVALUE=7e-12 ;
Q/S_length_ratio=1.079"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|G8U0G6|G8U0G6_SULAD ;
ALN/Q_length_ratio=0.669 ; DESCRIPTION=Radical SAM domain
protein OS=Sulfobacillus acidophilus (strain ATCC 700253 /
DSM 10332 / NAL) GN=Sulac_0680 PE=4 SV=1 ; EVALUE=9e-11 ;
Q/S_length_ratio=1.121"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A086ZJX1|A0A086ZJX1_9BIFI ;
ALN/Q_length_ratio=0.661 ; DESCRIPTION=Radical SAM domain
protein OS=Bifidobacterium bohemicum DSM 22767
GN=BBOH_0295 PE=4 SV=1 ; EVALUE=9e-11 ;
Q/S_length_ratio=1.206"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q8ZVS5|Q8ZVS5_PYRAE ;
ALN/Q_length_ratio=0.609 ; DESCRIPTION=Uncharacterized
protein OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2
/ DSM 7523 / JCM 9630 / NBRC 100827) GN=PAE2147 PE=4 SV=1
; EVALUE=2e-10 ; Q/S_length_ratio=1.587"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A075NZ83|A0A075NZ83_9ALTE ;
ALN/Q_length_ratio=0.745 ; DESCRIPTION=Coenzyme PQQ
synthesis protein E OS=Alteromonas australica GN=pqqE PE=3
SV=1 ; EVALUE=5e-10 ; Q/S_length_ratio=0.997"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A5GBP2|A5GBP2_GEOUR ;
ALN/Q_length_ratio=0.444 ; DESCRIPTION=Radical SAM domain
protein OS=Geobacter uraniireducens (strain Rf4)
GN=Gura_0794 PE=4 SV=1 ; EVALUE=4e-09 ;
Q/S_length_ratio=0.854"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K0AYQ2|K0AYQ2_CLOA9 ;
ALN/Q_length_ratio=0.312 ; DESCRIPTION=Radical SAM
domain-containing protein OS=Clostridium acidurici (strain
ATCC 7906 / DSM 604 / KCTC 5404 / 9a) GN=Curi_c07820 PE=4
SV=1 ; EVALUE=1e-08 ; Q/S_length_ratio=1.549"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2IY33|F2IY33_POLGS ;
ALN/Q_length_ratio=0.724 ; DESCRIPTION=Metallo cofactor
biosynthesis protein, conjectural OS=Polymorphum gilvum
(strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1)
GN=SL003B_2111 PE=4 SV=1 ; EVALUE=1e-08 ;
Q/S_length_ratio=1.095"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q2J7L2|Q2J7L2_FRASC ;
ALN/Q_length_ratio=0.711 ; DESCRIPTION=Radical SAM
OS=Frankia sp. (strain CcI3) GN=Francci3_3375 PE=4 SV=1 ;
EVALUE=3e-08 ; Q/S_length_ratio=0.595"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|W9CYZ9|W9CYZ9_9ACTO ;
ALN/Q_length_ratio=0.711 ; DESCRIPTION=Uncharacterized
protein OS=Frankia sp. CcI6 GN=CcI6DRAFT_04726 PE=4 SV=1 ;
EVALUE=5e-08 ; Q/S_length_ratio=1.089"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A084TPE9|A0A084TPE9_9ACTO ;
ALN/Q_length_ratio=0.711 ; DESCRIPTION=Radical SAM
superfamily enzyme OS=Frankia sp. Allo2
GN=ALLO2DRAFT_04679 PE=4 SV=1 ; EVALUE=5e-08 ;
Q/S_length_ratio=1.089"
/note="Pfam_scan:hit_1 (26..162);
Pfam:PF04055.16:Radical_SAM;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:166;
EVALUE:7.9e-10; BITSCORE: 39.1"
/note="Pfam_scan:hit_2 (22..136); Pfam:PF13353.1:Fer4_12;
Pfam_type:Domain;HMM_aln_Length:94; HMM_Length:139;
EVALUE:3.3e-05; BITSCORE: 24.0"
/note="Pfam_scan:hit_3 (237..322); Pfam:PF13186.1:SPASM;
Pfam_type:Domain;HMM_aln_Length:40; HMM_Length:64;
EVALUE:1.3e-06; BITSCORE: 28.6"
/note="GO_domain:GO:0003674"
BEGIN
1 MSTSVYKRPA PPEPPARMFR PRMVQLAPLY QCNLACPHCC VPIEWPDRLD IPTAVRFLEQ
61 AHQAGIGTIG FTGGEPFLYP EFLNALTARA AELGFRFDKL MTNGVWHRDA EHATAVLSDL
121 RDAGFSGKIG LSVDKFHGMD IEKLAEFCRV TRAVFARDTI LSLSYASRAP NKGLEPIKRL
181 AEALDGVVEW SKVLGRYLLV SDDFTMTACW NHLATVERAE ELPGDSWDGT WFEEDYCEGP
241 GQALIVNPKG EVKPCCGFAS DLDQLTIGNI YTDSLEQIVQ FARNHPVVGT VFRDGLTAIR
301 DEILARDPNA LPGATSNHCY FCWYVLAKGI YAQTTGKLEL LPEHGGSQWA KIVAEKGKTA
361 LPLLGDDQGP KGCGSGGCAQ K
//