LOCUS VTR94854.1 286 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana diaminopimelate epimerase : Diaminopimelate
epimerase OS=Singulisphaera acidiphila (strain ATCC BAA-
1392 / DSM 18658 / VKM B-2454 / MOB10) GN=dapF PE=3 SV=
1: DAP_epimerase: DAP_epimerase protein.
ACCESSION LR593886-4155
PROTEIN_ID VTR94854.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_28600"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DF30|L0DF30_SINAD ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Diaminopimelate
epimerase OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=dapF PE=3
SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R217|D2R217_PIRSD ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Diaminopimelate
epimerase OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=dapF PE=3 SV=1 ; EVALUE=1e-133 ;
Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6CA20|A6CA20_9PLAN ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Diaminopimelate
epimerase OS=Planctomyces maris DSM 8797 GN=dapF PE=3 SV=1
; EVALUE=1e-129 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A3ZPZ9|A3ZPZ9_9PLAN ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Diaminopimelate
epimerase OS=Blastopirellula marina DSM 3645 GN=dapF PE=3
SV=1 ; EVALUE=1e-126 ; Q/S_length_ratio=1.011"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F0SPA1|F0SPA1_PLABD ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Diaminopimelate
epimerase OS=Planctomyces brasiliensis (strain ATCC 49424
/ DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=dapF
PE=3 SV=1 ; EVALUE=1e-126 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D5SNB0|D5SNB0_PLAL2 ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Diaminopimelate
epimerase OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=dapF PE=3 SV=1 ;
EVALUE=1e-121 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1PZ14|Q1PZ14_9BACT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Diaminopimelate
epimerase OS=Candidatus Kuenenia stuttgartiensis GN=DapF
PE=3 SV=1 ; EVALUE=1e-113 ; Q/S_length_ratio=1.032"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|R7QYQ3|R7QYQ3_9FIRM ;
ALN/Q_length_ratio=0.969 ; DESCRIPTION=Diaminopimelate
epimerase OS=Roseburia sp. CAG:182 GN=dapF PE=3 SV=1 ;
EVALUE=1e-111 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|D4M005|D4M005_9FIRM ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Diaminopimelate
epimerase OS=Ruminococcus torques L2-14 GN=dapF PE=3 SV=1
; EVALUE=1e-107 ; Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E8R4P5|E8R4P5_ISOPI ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Diaminopimelate
epimerase OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=dapF PE=3 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I3II12|I3II12_9PLAN ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Diaminopimelate
epimerase OS=planctomycete KSU-1 GN=dapF PE=3 SV=1 ;
EVALUE=1e-107 ; Q/S_length_ratio=1.025"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D7AF85|D7AF85_GEOSK ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Diaminopimelate
epimerase OS=Geobacter sulfurreducens (strain DL-1 /
KN400) GN=dapF PE=3 SV=2 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q74FS5|Q74FS5_GEOSL ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Diaminopimelate
epimerase OS=Geobacter sulfurreducens (strain ATCC 51573 /
DSM 12127 / PCA) GN=dapF PE=3 SV=1 ; EVALUE=1e-107 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A5G8E2|A5G8E2_GEOUR ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Diaminopimelate
epimerase OS=Geobacter uraniireducens (strain Rf4) GN=dapF
PE=3 SV=1 ; EVALUE=1e-107 ; Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|R6NZZ5|R6NZZ5_9FIRM ;
ALN/Q_length_ratio=0.958 ; DESCRIPTION=Diaminopimelate
epimerase OS=Ruminococcus sp. CAG:55 GN=dapF PE=3 SV=1 ;
EVALUE=1e-107 ; Q/S_length_ratio=1.036"
/note="Pfam_scan:hit_1 (3..127);
Pfam:PF01678.14:DAP_epimerase;
Pfam_type:Domain;HMM_aln_Length:118; HMM_Length:121;
EVALUE:1.6e-32; BITSCORE: 111.9"
/note="Pfam_scan:hit_2 (157..278);
Pfam:PF01678.14:DAP_epimerase;
Pfam_type:Domain;HMM_aln_Length:117; HMM_Length:121;
EVALUE:2.8e-29; BITSCORE: 101.4"
/note="GO_domain:GO:0005737"
/note="GO_domain:GO:0006520"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:5.1.1.7"
/note="Enzyme_Code:EC:5.1.1.10"
BEGIN
1 MQFTKMHGIG NDYVYVDCVR QKPPADPAAL SRAVSDRHFG IGSDGLILIC PSERADARMR
61 MFNADGSESE MCGNGLRCVS KFVHDHGIAT KPRLAIETGR GVLTVDLEVK AGKVARVRVN
121 MGEPILESAK IPTTLPGDPP VNVPITFDHP KGRLEVTCVS MGNPHAVAYI DDEWLHVGEQ
181 DLVATVGPKI EHHEAFPRRI NAHFVKVHTP SEVTMRTWER GSGITLACGT GACAVCVAGV
241 LTGRTGRKLL AHLPGGDLEL EWSEADNCVY MTGPATEVFT GEWPTA
//