LOCUS VTR94842.1 793 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana wd-40 repeat protein : Uncultured bacterium
genome assembly Metasoil_fosmids_resub OS=uncultured bacterium
PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: WD40: WD40: WD40
protein.
ACCESSION LR593886-4143
PROTEIN_ID VTR94842.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_28720"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ;
ALN/Q_length_ratio=0.596 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=5e-69 ;
Q/S_length_ratio=0.684"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|H1WH51|H1WH51_9CYAN ;
ALN/Q_length_ratio=0.362 ; DESCRIPTION=WD-40 repeat
protein OS=Arthrospira sp. PCC 8005 GN=ARTHRO_50003 PE=4
SV=1 ; EVALUE=1e-49 ; Q/S_length_ratio=1.118"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|W6SPC1|W6SPC1_9CYAN ;
ALN/Q_length_ratio=0.362 ; DESCRIPTION=WD-40 repeat
protein OS=Arthrospira sp. GN=ARTHRO_40436 PE=4 SV=1 ;
EVALUE=1e-49 ; Q/S_length_ratio=1.118"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K9UX17|K9UX17_9CYAN ;
ALN/Q_length_ratio=0.362 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_1366 PE=4 SV=1 ; EVALUE=1e-46 ;
Q/S_length_ratio=1.259"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|G2YCL9|G2YCL9_BOTF4 ;
ALN/Q_length_ratio=0.363 ; DESCRIPTION=Similar to prolyl
oligopeptidase OS=Botryotinia fuckeliana (strain T4)
GN=BofuT4_P098240.1 PE=4 SV=1 ; EVALUE=8e-46 ;
Q/S_length_ratio=1.778"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B5VVI6|B5VVI6_ARTMA ;
ALN/Q_length_ratio=0.415 ; DESCRIPTION=WD-40 repeat
protein OS=Arthrospira maxima CS-328 GN=AmaxDRAFT_0527
PE=4 SV=1 ; EVALUE=2e-45 ; Q/S_length_ratio=0.957"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|H5SRM7|H5SRM7_9BACT ;
ALN/Q_length_ratio=0.369 ; DESCRIPTION=Hypothetical
conserved protein OS=Candidatus Acetothermus autotrophicum
GN=HGMM_OP2C292 PE=4 SV=1 ; EVALUE=2e-45 ;
Q/S_length_ratio=0.844"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|U5N4Y1|U5N4Y1_9BURK ;
ALN/Q_length_ratio=0.372 ; DESCRIPTION=NTPase-like protein
OS=Candidatus Symbiobacter mobilis CR GN=Cenrod_0250 PE=4
SV=1 ; EVALUE=8e-45 ; Q/S_length_ratio=0.688"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|B2IXC4|B2IXC4_NOSP7 ;
ALN/Q_length_ratio=0.472 ; DESCRIPTION=WD-40 repeat
protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=Npun_F1222 PE=4 SV=1 ; EVALUE=1e-44 ;
Q/S_length_ratio=0.654"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0YMI4|A0YMI4_LYNSP ;
ALN/Q_length_ratio=0.416 ; DESCRIPTION=WD-40 repeat
protein OS=Lyngbya sp. (strain PCC 8106) GN=L8106_17667
PE=4 SV=1 ; EVALUE=2e-44 ; Q/S_length_ratio=0.580"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|G9N0E0|G9N0E0_HYPVG ;
ALN/Q_length_ratio=0.415 ; DESCRIPTION=Uncharacterized
protein OS=Hypocrea virens (strain Gv29-8 / FGSC 10586)
GN=TRIVIDRAFT_209827 PE=4 SV=1 ; EVALUE=1e-43 ;
Q/S_length_ratio=0.755"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0DP33|A0DP33_PARTE ;
ALN/Q_length_ratio=0.388 ; DESCRIPTION=Chromosome
undetermined scaffold_588, whole genome shotgun sequence
OS=Paramecium tetraurelia GN=GSPATT00039708001 PE=4 SV=1 ;
EVALUE=3e-43 ; Q/S_length_ratio=1.335"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A5URP9|A5URP9_ROSS1 ;
ALN/Q_length_ratio=0.410 ; DESCRIPTION=Ribosome assembly
protein 4 (RSA4) OS=Roseiflexus sp. (strain RS-1)
GN=RoseRS_0892 PE=4 SV=1 ; EVALUE=4e-43 ;
Q/S_length_ratio=1.139"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|K9TKV8|K9TKV8_9CYAN ;
ALN/Q_length_ratio=0.449 ; DESCRIPTION=WD40
repeat-containing protein OS=Oscillatoria acuminata PCC
6304 GN=Oscil6304_3065 PE=3 SV=1 ; EVALUE=4e-43 ;
Q/S_length_ratio=0.915"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|L7E938|L7E938_MICAE ;
ALN/Q_length_ratio=0.419 ; DESCRIPTION=WD domain, G-beta
repeat family protein OS=Microcystis aeruginosa TAIHU98
GN=O53_4002 PE=4 SV=1 ; EVALUE=5e-43 ;
Q/S_length_ratio=2.013"
/note="Pfam_scan:hit_1 (36..101);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:71;
EVALUE:6.7e-08; BITSCORE: 32.0"
/note="Pfam_scan:hit_2 (127..179);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:50; HMM_Length:54;
EVALUE:2e-12; BITSCORE: 46.3"
/note="Pfam_scan:hit_3 (285..323); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:37; HMM_Length:39;
EVALUE:1.3e-11; BITSCORE: 43.9"
/note="Pfam_scan:hit_4 (519..557); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:34; HMM_Length:39;
EVALUE:2.2e-11; BITSCORE: 43.1"
/note="Pfam_scan:hit_5 (573..604); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:27; HMM_Length:39;
EVALUE:7.6e-05; BITSCORE: 22.4"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MEHHLHTLVC RAAGDVRSDS ELLALIRDDS GAFAELVARH GALVWGVCRH LLGESDAEDA
61 FQATFLALLR STIRDGTVLA SWLHGAAVRV SLTARRAAGR RRTHERNAAI SESTSRTTPD
121 DWDDTMAVVH REVAALPGAD RAAFILCVLE GLTQAETARR LGATPGAVAG HVARAKKRLV
181 ARLTERGVVP GLVALGVASV AGAVPSGVVV RVLNLTRANA SPAVLWLAKG ATDMTASSTK
241 LICAVVAVTV GLIASVVAAG FGPPPAAPAT PPAGVKTPGV TEGEPKPAHV LAGHADRVMS
301 VAFSPDGRWI ATAAWDGTAR LWDAATGKES RKLEFPATKG NNEFGHIAFS PDGALVVTSV
361 RESQDKWSVV VWNQRAGEKV RSLPAETGSV AISPDGKLIA CGGYQHIGFY ETATGKLVRE
421 IRGGEKQLRI ESLTFASDGK TLLSTGHPPT PQRGDGVTRL TIMPDVVRVW DVATGKEKAS
481 PLNGQVVGRH GQRVALSTDG RILVHSSDKD IILRDTVTGR ERAKLIGHKD AVCDFAFSPD
541 GRTLATGSMD GTVRFWDLLT CKELGSFGKE VDPTKGGWVL SVVFSPDGRA LASGGLNKTV
601 DVWDVSRITS RVRPPVERSA GELEADWKDL GSDAAKGHAV LSRLVLSAKS AVPFLGERLL
661 ATSKADTKPI ERLIENLDNE TFEVRERATK ELTALGDRAA HSLRKALAGT PSPETRQRLN
721 ALLARIDSAE PSAEMLREIR AVEALEAIGN ADARKLLDAL TAGPAEMRLT QEAKASVDRL
781 TKREKARTPA PQK
//