LOCUS VTR94832.1 568 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana leucine-rich repeat-containing protein
typical subtype : Repeat-companion domain protein OS=Isosphaera
pallida (strain ATCC 43644 / DSM 9630 / IS1B) GN=Isop_0537
PE=4 SV=1: LRR_6: LRR_6 protein.
ACCESSION LR593886-4133
PROTEIN_ID VTR94832.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_28820"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|E8R012|E8R012_ISOPI ;
ALN/Q_length_ratio=0.306 ; DESCRIPTION=Repeat-companion
domain protein OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_0537 PE=4 SV=1 ; EVALUE=6e-15 ;
Q/S_length_ratio=1.797"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|E8QY08|E8QY08_ISOPI ;
ALN/Q_length_ratio=0.592 ; DESCRIPTION=Repeat-companion
domain protein OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_0392 PE=4 SV=1 ; EVALUE=2e-13 ;
Q/S_length_ratio=1.291"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2VIH9|D2VIH9_NAEGR ;
ALN/Q_length_ratio=0.644 ; DESCRIPTION=Leucine rich repeat
family protein OS=Naegleria gruberi GN=NAEGRDRAFT_58316
PE=4 SV=1 ; EVALUE=4e-13 ; Q/S_length_ratio=1.138"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A9AVT3|A9AVT3_HERA2 ;
ALN/Q_length_ratio=0.604 ; DESCRIPTION=Leucine-rich
repeat-containing protein typical subtype OS=Herpetosiphon
aurantiacus (strain ATCC 23779 / DSM 785) GN=Haur_4051
PE=4 SV=1 ; EVALUE=1e-12 ; Q/S_length_ratio=1.420"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E8QY07|E8QY07_ISOPI ;
ALN/Q_length_ratio=0.759 ; DESCRIPTION=Repeat-companion
domain protein OS=Isosphaera pallida (strain ATCC 43644 /
DSM 9630 / IS1B) GN=Isop_0391 PE=4 SV=1 ; EVALUE=1e-12 ;
Q/S_length_ratio=1.029"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M1Z160|M1Z160_NITG3 ;
ALN/Q_length_ratio=0.403 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_780005 PE=4 SV=1 ; EVALUE=2e-12 ;
Q/S_length_ratio=1.759"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A0A077FGR5|A0A077FGR5_9RICK ;
ALN/Q_length_ratio=0.519 ; DESCRIPTION=Ran
GTPase-activating protein (RanGAP) involved in mRNA
processing and transport OS=Rickettsiales bacterium Ac37b
GN=NOVO_01235 PE=4 SV=1 ; EVALUE=2e-12 ;
Q/S_length_ratio=0.830"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M1Z0M1|M1Z0M1_NITG3 ;
ALN/Q_length_ratio=0.347 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_570016 PE=4 SV=1 ; EVALUE=5e-12 ;
Q/S_length_ratio=2.119"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E8QY06|E8QY06_ISOPI ;
ALN/Q_length_ratio=0.782 ; DESCRIPTION=Uncharacterized
protein OS=Isosphaera pallida (strain ATCC 43644 / DSM
9630 / IS1B) GN=Isop_0390 PE=4 SV=1 ; EVALUE=3e-10 ;
Q/S_length_ratio=1.118"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D2V4Z4|D2V4Z4_NAEGR ;
ALN/Q_length_ratio=0.340 ; DESCRIPTION=Leucine-rich
repeat, typical subtype-like protein OS=Naegleria gruberi
GN=NAEGRDRAFT_46752 PE=4 SV=1 ; EVALUE=4e-10 ;
Q/S_length_ratio=1.031"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|D2V2A4|D2V2A4_NAEGR ;
ALN/Q_length_ratio=0.296 ; DESCRIPTION=Leucine-rich
repeat, typical subtype OS=Naegleria gruberi
GN=NAEGRDRAFT_62933 PE=4 SV=1 ; EVALUE=4e-10 ;
Q/S_length_ratio=1.552"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L0DGZ0|L0DGZ0_SINAD ;
ALN/Q_length_ratio=0.232 ; DESCRIPTION=Repeat-companion
domain TIGR02996 OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_4455
PE=4 SV=1 ; EVALUE=7e-10 ; Q/S_length_ratio=1.086"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|I7LZM8|I7LZM8_TETTS ;
ALN/Q_length_ratio=0.423 ; DESCRIPTION=LRR, typical
subtype protein OS=Tetrahymena thermophila (strain SB210)
GN=TTHERM_00716060 PE=4 SV=2 ; EVALUE=7e-10 ;
Q/S_length_ratio=1.475"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D2W230|D2W230_NAEGR ;
ALN/Q_length_ratio=0.340 ; DESCRIPTION=Predicted protein
OS=Naegleria gruberi GN=NAEGRDRAFT_75440 PE=4 SV=1 ;
EVALUE=8e-10 ; Q/S_length_ratio=1.690"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M1Z3C3|M1Z3C3_NITG3 ;
ALN/Q_length_ratio=0.592 ; DESCRIPTION=Uncharacterized
protein OS=Nitrospina gracilis (strain 3/211)
GN=NITGR_980084 PE=4 SV=1 ; EVALUE=9e-10 ;
Q/S_length_ratio=1.539"
/note="Pfam_scan:hit_1 (256..279); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:24;
EVALUE:0.39; BITSCORE: 10.9"
/note="Pfam_scan:hit_2 (390..412); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:19; HMM_Length:24;
EVALUE:0.029; BITSCORE: 14.4"
/note="GO_domain:GO:0003674"
BEGIN
1 MSTETALLRA IRESPDEDTP RLVYADYLDE EGHSARAEFI RVQIERARLP EGAPQCAALE
61 DREHDLLAEH ESAWLGVAPD DLDGLTEWEF ERGFVNEVAA NPYFMLGPGS DLCAAHPVRR
121 WRVQGGQMDM IEDLRETGQK TWFGRLEAID LAGWYTTIGE LGHFLCRSNF ARLRELDLTA
181 RPGLGDLPEL LGYAPFRDQL KVLRCGAPAQ YYDEGRLDAW ELVRALGTDS RLEELTTAGA
241 QLTADDLEGL LAAPCCQSLT ALDLRYNQIA PNGWEAFRNS KCRLRELDIS GTPLGTISLD
301 NLLGCASVVE LQRLQMNGCG SAMANLRALA RSRFWTRAES LRMQQGSVPE ISLEPLFTAT
361 GSSALRVLDV GQNWLRDGGV AQLCEAPWAG ALTYLDLSSN YLTDEALRTL ARSGRFKNLH
421 TLHLNFNSVY HQDEAESHES ITDAGLRALA ECPDLANLRV LSVSGTRISD AGVDAVLNSP
481 HWRLSGLRLS QCQLRRSVLD VLASSPRLAR LQVLDLSRND EIDVDDLSPL AESEYLSPQT
541 ELDISGMYNA HSAVRTALIE RLGRRLSE
//