LOCUS VTR94811.1 1390 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana multi-sensor hybrid histidine kinase
: Multi-sensor hybrid histidine kinase OS=Chthoniobacter
flavus Ellin428 GN=CfE428DRAFT_6228 PE=4 SV=1: Response_reg:
GAF_3: PAS_4: PAS_4: GAF_2: PAS_9: PAS_3: HisKA: HATPase_c:
Response_reg protein.
ACCESSION LR593886-4112
PROTEIN_ID VTR94811.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_29030"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B4DBD7|B4DBD7_9BACT ;
ALN/Q_length_ratio=0.660 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_6228 PE=4 SV=1 ; EVALUE=1e-147 ;
Q/S_length_ratio=1.184"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|B4CYF0|B4CYF0_9BACT ;
ALN/Q_length_ratio=0.456 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Chthoniobacter flavus Ellin428
GN=CfE428DRAFT_1688 PE=4 SV=1 ; EVALUE=1e-145 ;
Q/S_length_ratio=1.318"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q1IM85|Q1IM85_KORVE ;
ALN/Q_length_ratio=0.383 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Koribacter versatilis (strain
Ellin345) GN=Acid345_3014 PE=4 SV=1 ; EVALUE=1e-140 ;
Q/S_length_ratio=1.228"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E1Y9P4|E1Y9P4_9DELT ;
ALN/Q_length_ratio=0.381 ; DESCRIPTION=Putative
uncharacterized protein OS=uncultured Desulfobacterium sp.
GN=N47_I07080 PE=4 SV=1 ; EVALUE=1e-138 ;
Q/S_length_ratio=1.989"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|W0RH98|W0RH98_9BACT ;
ALN/Q_length_ratio=0.368 ; DESCRIPTION=PAS sensor protein
OS=Gemmatimonadetes bacterium KBS708 GN=J421_2962 PE=4
SV=1 ; EVALUE=1e-131 ; Q/S_length_ratio=1.856"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D8PJ17|D8PJ17_9BACT ;
ALN/Q_length_ratio=0.486 ; DESCRIPTION=Putative Hybrid
sensor histidine kinase OS=Candidatus Nitrospira defluvii
GN=NIDE3570 PE=4 SV=1 ; EVALUE=1e-130 ;
Q/S_length_ratio=1.346"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A5G434|A5G434_GEOUR ;
ALN/Q_length_ratio=0.450 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Geobacter uraniireducens
(strain Rf4) GN=Gura_2373 PE=4 SV=1 ; EVALUE=1e-129 ;
Q/S_length_ratio=1.808"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|T0LE56|T0LE56_9BACT ;
ALN/Q_length_ratio=0.400 ; DESCRIPTION=Uncharacterized
protein OS=candidate division ZIXI bacterium RBG-1
GN=RBG1_1C00001G0253 PE=4 SV=1 ; EVALUE=1e-129 ;
Q/S_length_ratio=1.452"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0LGZ9|A0LGZ9_SYNFM ;
ALN/Q_length_ratio=0.400 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Syntrophobacter fumaroxidans
(strain DSM 10017 / MPOB) GN=Sfum_1007 PE=4 SV=1 ;
EVALUE=1e-129 ; Q/S_length_ratio=2.496"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|H1XPA3|H1XPA3_9BACT ;
ALN/Q_length_ratio=0.455 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Caldithrix abyssi DSM 13497
GN=Calab_2608 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=2.175"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E1Y9P1|E1Y9P1_9DELT ;
ALN/Q_length_ratio=0.673 ; DESCRIPTION=Putative
uncharacterized protein OS=uncultured Desulfobacterium sp.
GN=N47_I07050 PE=4 SV=1 ; EVALUE=1e-128 ;
Q/S_length_ratio=1.110"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|T0LG56|T0LG56_9BACT ;
ALN/Q_length_ratio=0.455 ; DESCRIPTION=PAS sensor protein
OS=candidate division ZIXI bacterium RBG-1
GN=RBG1_1C00001G0797 PE=4 SV=1 ; EVALUE=1e-127 ;
Q/S_length_ratio=1.714"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2NF38|F2NF38_DESAR ;
ALN/Q_length_ratio=0.366 ; DESCRIPTION=Multi-sensor hybrid
histidine kinase OS=Desulfobacca acetoxidans (strain ATCC
700848 / DSM 11109 / ASRB2) GN=Desac_0492 PE=4 SV=1 ;
EVALUE=1e-126 ; Q/S_length_ratio=1.107"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q01W39|Q01W39_SOLUE ;
ALN/Q_length_ratio=0.325 ; DESCRIPTION=PAS/PAC sensor
hybrid histidine kinase OS=Solibacter usitatus (strain
Ellin6076) GN=Acid_5173 PE=4 SV=1 ; EVALUE=1e-125 ;
Q/S_length_ratio=2.752"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B5EFB5|B5EFB5_GEOBB ;
ALN/Q_length_ratio=0.449 ; DESCRIPTION=Sensor histidine
kinase response regulator, PAS and PAS domain-containing
OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 /
DSM 16622) GN=Gbem_3878 PE=4 SV=1 ; EVALUE=1e-125 ;
Q/S_length_ratio=2.065"
/note="Pfam_scan:hit_1 (4..117);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:3.9e-22; BITSCORE: 78.3"
/note="Pfam_scan:hit_2 (176..309); Pfam:PF13492.1:GAF_3;
Pfam_type:Domain;HMM_aln_Length:122; HMM_Length:129;
EVALUE:6.6e-08; BITSCORE: 32.7"
/note="Pfam_scan:hit_3 (353..464); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:109; HMM_Length:110;
EVALUE:5.9e-13; BITSCORE: 48.8"
/note="Pfam_scan:hit_4 (480..589); Pfam:PF08448.5:PAS_4;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:110;
EVALUE:1.8e-20; BITSCORE: 72.9"
/note="Pfam_scan:hit_5 (607..754); Pfam:PF13185.1:GAF_2;
Pfam_type:Domain;HMM_aln_Length:147; HMM_Length:148;
EVALUE:6.7e-18; BITSCORE: 65.6"
/note="Pfam_scan:hit_6 (773..873); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:102; HMM_Length:104;
EVALUE:9.7e-12; BITSCORE: 45.1"
/note="Pfam_scan:hit_7 (912..998); Pfam:PF08447.6:PAS_3;
Pfam_type:Domain;HMM_aln_Length:85; HMM_Length:91;
EVALUE:9.7e-17; BITSCORE: 60.8"
/note="Pfam_scan:hit_8 (1020..1084);
Pfam:PF00512.20:HisKA; Pfam_type:Domain;HMM_aln_Length:63;
HMM_Length:68; EVALUE:1.7e-06; BITSCORE: 27.9"
/note="Pfam_scan:hit_9 (1127..1248);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:108; HMM_Length:111;
EVALUE:2.2e-21; BITSCORE: 75.6"
/note="Pfam_scan:hit_10 (1271..1383);
Pfam:PF00072.19:Response_reg;
Pfam_type:Domain;HMM_aln_Length:110; HMM_Length:112;
EVALUE:2e-16; BITSCORE: 59.9"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MATILIVDDR PANREFLVTL LGYSDHRLLE AGDGAEGLAL VRAERPDLVI ADVLMPTMDG
61 YEFVRQLRAE PAIANTRVIF YTAHFHEPEA RRLAVDCGVA AVLTKPSEPE VVLQTIETVL
121 GNTPPPSRVP TVTEFDREHV RVMTDKLAQR AEELRRTNER LTALVELGLQ LGSERDPVRL
181 LHLFCDAARQ IIGARYALVG ISMTDGRYRH FMTSGMDAVT TARIGRPGPL IGVVADAIAA
241 GDCFRALTPD GPVAIGAPAS FPAAGAVLVA PVLSPARVYG WICLLDKVGA DGFSEEDEQL
301 VKMLAAQTGR IYENGSLYSD LLSRTSELAQ EISERKRAEA EVRESEERFR SAFEHTGVAT
361 ALTDLDSRFV RVNAAFAQTF GYAPHELPGM VMGDVMNPDD RAAIRAGCAR LLAGEARSFQ
421 SALRYICRAG RHFWGTTNVS LVRGPDGRPV QFVSQVQDIT EQKRAEAEVR RSADLLRAVA
481 DGTTDAVFVK DRDGKYLLFN EAAARFVGKP VAEVLGKDDT TLFDPASARV SMDNDRRVLA
541 SGLTETEEET LTAVGITRTY LATKGPYRDA DGNVIGVIGI SRDITDRKRA EQRVTAQHAV
601 VSALAQAADL REAAPKLLEA VCETTGWDVG GLWIVDHQSR VLSCVDLWPA EEPDLAEFRG
661 VSRGTTFAPG VGLPGRVWAS GEPLWVVDVT RDPNFPRSDA AARADLHGGF GFPIRLGNEV
721 LGVAEFFSRT SRRPDAELLR TFETLGSQIG QFIERKRAEG GLRLFRALID RTIDGVEVID
781 PETGRFLDAN EQAAVLHGYT RPEFLRLGVF DVDPVVARRP WKEGISARRA SGENSFESLH
841 RRKDGSTFPV EVNLSFIQLD REYLVAVVRD ISERKHTEEA LRAAQHRLEH VVSSSPSVLF
901 ALGVGADEIR GISWISGTVR EMLGYEPSEA FERDWWTGNI HPEDRGRVIS QTQADLFARG
961 RASNEYRFRH GDGTYRWTRG EIRLTRNAAG EPIEAVGAWS DITERKLLEE QVQQSQKMEA
1021 VGRLAGGVAH DFNNLLTVIN GYGEIALASL PDTDINRELI REMVKAGERA TGLTRQLLAF
1081 SRKAIIEPKI LDLTVVVTDV ERMLRRIVGE DIQLTVAADP ETGFVLADPG QIEQVILNLV
1141 VNARDAMPSG GRLTIELRNV ELDESYTRTH SDARPGAYVL LAVTDSGSGM DAATMARIFE
1201 PFFSTKGEHG TGLGLATLHG IVKQSGGHVG VYSEVGQGTT FKVYLPRTEP GPIAPKSRML
1261 QQLMPKGGET LLLVEDEDGV RALARHVLRG CGYTVLEARD GVEALRLTGE HRGRIHLLLT
1321 DVVMPRMNGR QLAERLMELV PGIQVLFLSG YTDDAVVRHG ILEAEVAFLQ KPFTPGSLAA
1381 KVREILDATT
//