LOCUS VTR94768.1 531 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana Putative regulatory subunit (Fragment)
OS=Gemmata sp. Wa1-1 PE=4 SV=1: LRR_6: LRR_6: LRR_6 protein.
ACCESSION LR593886-4069
PROTEIN_ID VTR94768.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_29460"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q5EUH2|Q5EUH2_9PLAN ;
ALN/Q_length_ratio=0.623 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=4e-47 ; Q/S_length_ratio=0.965"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A090KN24|A0A090KN24_9BACT ;
ALN/Q_length_ratio=0.840 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=4e-39 ;
Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q1D533|Q1D533_MYXXD ;
ALN/Q_length_ratio=0.561 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Myxococcus xanthus (strain DK 1622)
GN=MXAN_4062 PE=4 SV=1 ; EVALUE=3e-35 ;
Q/S_length_ratio=0.851"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q5EUG5|Q5EUG5_9PLAN ;
ALN/Q_length_ratio=0.539 ; DESCRIPTION=Putative regulatory
subunit (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1 ;
EVALUE=4e-33 ; Q/S_length_ratio=1.321"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|V4SJB3|V4SJB3_9ROSI ;
ALN/Q_length_ratio=0.497 ; DESCRIPTION=Uncharacterized
protein OS=Citrus clementina GN=CICLE_v10025249mg PE=4
SV=1 ; EVALUE=5e-32 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|X0TGY3|X0TGY3_9ZZZZ ;
ALN/Q_length_ratio=0.490 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S01H1_S00874 (Fragment) OS=marine
sediment metagenome GN=S01H1_25862 PE=4 SV=1 ;
EVALUE=1e-31 ; Q/S_length_ratio=1.876"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A6C938|A6C938_9PLAN ;
ALN/Q_length_ratio=0.614 ; DESCRIPTION=Leucine-rich repeat
domain protein OS=Planctomyces maris DSM 8797
GN=PM8797T_14711 PE=4 SV=1 ; EVALUE=1e-31 ;
Q/S_length_ratio=0.419"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|D5SX33|D5SX33_PLAL2 ;
ALN/Q_length_ratio=0.768 ; DESCRIPTION=Leucine-rich
repeat, ribonuclease inhibitor subtype OS=Planctomyces
limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 /
290) GN=Plim_3843 PE=4 SV=1 ; EVALUE=6e-31 ;
Q/S_length_ratio=1.120"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A6C3D3|A6C3D3_9PLAN ;
ALN/Q_length_ratio=0.657 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_26210
PE=4 SV=1 ; EVALUE=9e-31 ; Q/S_length_ratio=1.154"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A6C325|A6C325_9PLAN ;
ALN/Q_length_ratio=0.559 ; DESCRIPTION=Uncharacterized
protein OS=Planctomyces maris DSM 8797 GN=PM8797T_09949
PE=4 SV=1 ; EVALUE=2e-30 ; Q/S_length_ratio=0.983"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K3YR49|K3YR49_SETIT ;
ALN/Q_length_ratio=0.561 ; DESCRIPTION=Uncharacterized
protein OS=Setaria italica GN=Si016743m.g PE=4 SV=1 ;
EVALUE=4e-30 ; Q/S_length_ratio=0.912"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5RNG7|M5RNG7_9PLAN ;
ALN/Q_length_ratio=0.576 ; DESCRIPTION=Regulatory subunit
OS=Rhodopirellula maiorica SM1 GN=RMSM_07547 PE=4 SV=1 ;
EVALUE=5e-30 ; Q/S_length_ratio=1.221"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|B2A418|B2A418_NATTJ ;
ALN/Q_length_ratio=0.460 ; DESCRIPTION=Leucine-rich
repeat, ribonuclease inhibitor subtype OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=Nther_1542 PE=4 SV=1 ; EVALUE=7e-30 ;
Q/S_length_ratio=1.544"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|K3YRB7|K3YRB7_SETIT ;
ALN/Q_length_ratio=0.554 ; DESCRIPTION=Uncharacterized
protein OS=Setaria italica GN=Si016743m.g PE=4 SV=1 ;
EVALUE=1e-29 ; Q/S_length_ratio=0.958"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M5WTL1|M5WTL1_PRUPE ;
ALN/Q_length_ratio=0.484 ; DESCRIPTION=Uncharacterized
protein OS=Prunus persica GN=PRUPE_ppa004098mg PE=4 SV=1 ;
EVALUE=1e-29 ; Q/S_length_ratio=1.002"
/note="Pfam_scan:hit_1 (276..305); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:17; HMM_Length:24;
EVALUE:0.18; BITSCORE: 11.9"
/note="Pfam_scan:hit_2 (307..329); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:20; HMM_Length:24;
EVALUE:0.7; BITSCORE: 10.1"
/note="Pfam_scan:hit_3 (330..353); Pfam:PF13516.1:LRR_6;
Pfam_type:Repeat;HMM_aln_Length:22; HMM_Length:24;
EVALUE:0.022; BITSCORE: 14.8"
BEGIN
1 MFVYRGILIA GAVLLGFAPV SAGAPVPPPA PSPVGTWWVE GNGFYGELVI KEIKDGKIDG
61 TIYDQPISGT YDASTNKLTF TRFQNADDKT GCQVWTGTLL PPADAESKQG GISGSYKSTA
121 GPEWGQAGKE YSWSAWGKNE AAERALRFVS ERGGRFALPP KGRGVYTFES VPKDNPRELL
181 RVRACFAFVG QLDLSDIRVR DEDLKELAGL KRLHYLILNN TAVTGSGFDA LSSVERLLWV
241 SMANTEVTSD GLKKIAKMPH INTINLAGAK VPNADLKELT PLRELLQLDL NGTNVTDEGL
301 KGLAGIHTLK ALNLNNTAIS GKGLEELAHL KYLEVLSLNN TTLTDDGMKA IGKVLSVREL
361 HLKNAKVTEA GLKELGSLKK LVRLDLPGTP VTDSVLSAWN GLSDLVALDA SRSRVTDQGF
421 KELARLKSLE RLYLEGTSVT GKDVSKLAGL NLDQLDLNYT KVGDLELREL AKLGSVRSIQ
481 LDGTAVTDEG LNDEVVRGLD HVGVLLLRNT KVTKTRVAEL KQQGFRRGII R
//