LOCUS VTR94757.1 1522 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana cell surface protein : Internalin,
putative OS=Chondromyces apiculatus DSM 436 GN=CAP_1014
PE=4 SV=1: Autotrns_rpt: Autotrns_rpt: Autotrns_rpt: Calx-
beta: VCBS: VCBS protein.
ACCESSION LR593886-4058
PROTEIN_ID VTR94757.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_29570"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A017TCT8|A0A017TCT8_9DELT ;
ALN/Q_length_ratio=0.311 ; DESCRIPTION=Internalin,
putative OS=Chondromyces apiculatus DSM 436 GN=CAP_1014
PE=4 SV=1 ; EVALUE=1e-103 ; Q/S_length_ratio=1.473"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A9GLH6|A9GLH6_SORC5 ;
ALN/Q_length_ratio=0.298 ; DESCRIPTION=Putative cell
surface protein OS=Sorangium cellulosum (strain So ce56)
GN=sce0119 PE=4 SV=1 ; EVALUE=1e-102 ;
Q/S_length_ratio=1.061"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|S4XKW1|S4XKW1_SORCE ;
ALN/Q_length_ratio=0.299 ; DESCRIPTION=Uncharacterized
protein OS=Sorangium cellulosum So0157-2 GN=SCE1572_00410
PE=4 SV=1 ; EVALUE=1e-97 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A017TET6|A0A017TET6_9DELT ;
ALN/Q_length_ratio=0.301 ; DESCRIPTION=Internalin,
putative OS=Chondromyces apiculatus DSM 436 GN=CAP_1012
PE=4 SV=1 ; EVALUE=1e-97 ; Q/S_length_ratio=0.929"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A017SUJ8|A0A017SUJ8_9DELT ;
ALN/Q_length_ratio=0.313 ; DESCRIPTION=Internalin,
putative OS=Chondromyces apiculatus DSM 436 GN=CAP_0816
PE=4 SV=1 ; EVALUE=5e-97 ; Q/S_length_ratio=1.445"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A9GL49|A9GL49_SORC5 ;
ALN/Q_length_ratio=0.295 ; DESCRIPTION=Cell surface SD
repeat protein OS=Sorangium cellulosum (strain So ce56)
GN=sdr PE=4 SV=1 ; EVALUE=6e-94 ; Q/S_length_ratio=1.073"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|U2U331|U2U331_9DELT ;
ALN/Q_length_ratio=0.296 ; DESCRIPTION=Putative internalin
OS=Myxococcus sp. (contaminant ex DSM 436) GN=A176_00262
PE=4 SV=1 ; EVALUE=8e-93 ; Q/S_length_ratio=0.555"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A9FHP8|A9FHP8_SORC5 ;
ALN/Q_length_ratio=0.304 ; DESCRIPTION=Conserved repeat
domain protein OS=Sorangium cellulosum (strain So ce56)
GN=sce8067 PE=4 SV=1 ; EVALUE=2e-88 ;
Q/S_length_ratio=2.642"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A017TB10|A0A017TB10_9DELT ;
ALN/Q_length_ratio=0.274 ; DESCRIPTION=Internalin,
putative OS=Chondromyces apiculatus DSM 436 GN=CAP_1959
PE=4 SV=1 ; EVALUE=3e-88 ; Q/S_length_ratio=1.651"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q12HS5|Q12HS5_SHEDO ;
ALN/Q_length_ratio=0.404 ; DESCRIPTION=Cadherin
OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090
/ DSM 15013) GN=Sden_3728 PE=4 SV=1 ; EVALUE=2e-79 ;
Q/S_length_ratio=0.493"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|Q2SHB9|Q2SHB9_HAHCH ;
ALN/Q_length_ratio=0.397 ; DESCRIPTION=Uncharacterized
protein with a C-terminal OMP (Outer membrane protein)
domain OS=Hahella chejuensis (strain KCTC 2396)
GN=HCH_03194 PE=4 SV=1 ; EVALUE=5e-79 ;
Q/S_length_ratio=0.684"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A096F6Z3|A0A096F6Z3_COMTE ;
ALN/Q_length_ratio=0.392 ; DESCRIPTION=Uncharacterized
protein (Fragment) OS=Comamonas testosteroni GN=P353_22975
PE=4 SV=1 ; EVALUE=2e-76 ; Q/S_length_ratio=0.422"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|I0HVW9|I0HVW9_RUBGI ;
ALN/Q_length_ratio=0.380 ; DESCRIPTION=Uncharacterized
protein OS=Rubrivivax gelatinosus (strain NBRC 100245 /
IL144) GN=RGE_38170 PE=4 SV=1 ; EVALUE=3e-75 ;
Q/S_length_ratio=0.516"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|H2FY36|H2FY36_OCESG ;
ALN/Q_length_ratio=0.326 ; DESCRIPTION=Uncharacterized
protein OS=Oceanimonas sp. (strain GK1) GN=GU3_06185 PE=4
SV=1 ; EVALUE=1e-74 ; Q/S_length_ratio=0.535"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A096FC66|A0A096FC66_COMTE ;
ALN/Q_length_ratio=0.387 ; DESCRIPTION=Glycosyl hydrolase
OS=Comamonas testosteroni GN=P367_04095 PE=4 SV=1 ;
EVALUE=5e-71 ; Q/S_length_ratio=0.401"
/note="Pfam_scan:hit_1 (780..811);
Pfam:PF12951.2:Autotrns_rpt;
Pfam_type:Repeat;HMM_aln_Length:31; HMM_Length:32;
EVALUE:1.5e-12; BITSCORE: 46.9"
/note="Pfam_scan:hit_2 (846..876);
Pfam:PF12951.2:Autotrns_rpt;
Pfam_type:Repeat;HMM_aln_Length:31; HMM_Length:32;
EVALUE:4.2e-08; BITSCORE: 32.7"
/note="Pfam_scan:hit_3 (931..962);
Pfam:PF12951.2:Autotrns_rpt;
Pfam_type:Repeat;HMM_aln_Length:28; HMM_Length:32;
EVALUE:4.7e-08; BITSCORE: 32.5"
/note="Pfam_scan:hit_4 (1112..1200);
Pfam:PF03160.9:Calx-beta;
Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:100;
EVALUE:1.1e-14; BITSCORE: 54.1"
/note="Pfam_scan:hit_5 (1268..1331); Pfam:PF13517.1:VCBS;
Pfam_type:Repeat;HMM_aln_Length:60; HMM_Length:61;
EVALUE:8.5e-07; BITSCORE: 29.2"
/note="Pfam_scan:hit_6 (1372..1434); Pfam:PF13517.1:VCBS;
Pfam_type:Repeat;HMM_aln_Length:59; HMM_Length:61;
EVALUE:4.7e-07; BITSCORE: 30.0"
/note="GO_domain:GO:0008150"
/note="GO_domain:GO:0005622"
BEGIN
1 MSFRTNRDVP RGQPTCGPWG WSGPMTSGAP RPVRLSVEAL EDRVVPALVA QRGDFVMIGN
61 TLAQDAGPGV IAPVTGTVGG VGSNTSDTAP DVYWRADSPT NGSATADTTI TALNARTTAV
121 LNLPAGATVT HAYLYWAGTG APDNNALIER PGTFSQSVTA TATYTAALNG PAYMGVADVT
181 ALVQQYGTGA YRIGDVDSLP LANVNHSSLF AGWSIVVIYA RSSDPFRTFF ISDQLNQVLS
241 GGSTTITLNG FTVSNPGGRL GVIAFDGDDS LSGDGLSVNG IALSNANNPA NNIFNGTRTN
301 NGAVVSDPND LPRLTGGPRS MSGIDIDTFD LAGALVGGQT QATAQATTNS DVYLVGPLVL
361 AINSFAPEFG PSTLTATDVN GGPLLAGDVV TYTVTVQNLG DDASVGSALA AALPTGVTYV
421 PGSIHITSGS NTGTQTDATG DDAGGYDPVS RTVSVNLGTG AGSGGGGRIG IAETTTVTFQ
481 VIVNVGATQV VMPVTVSGAS ETGTTAVATT LTSTLNVTSN TAPTLTDLDG DSVPWAGVGN
541 TVRLDAGTPL TIGDADLDAL NGGLGNWAGA ALTVWRSGTA VTTDVFGFDL TGALFTVNGN
601 TLEANGLAFA TFTSTAGVLT VAFTSTGTTA TTALVQDVLR RVTYRNDTPA GDASVRFELS
661 DGVIAAAATV TVTSNEIYVN DTGDTADADR NTITLREAAA IAATQPGAQT IRFTAAAFAT
721 PRTITLGSPL ALDANLMIDA SGAAGVTITG AGLQLGGALT YIAGAGDSDT IAVTITGSGS
781 VTKAGAGTLT LSGANTYTGT TTVSGGTLSI ASGTNLGAGT VALAAGATLE VIGTTTLANT
841 ITGAGTLTKN GAGTLTLSGA NSYGNTVVAG GTLSIASDAN LGTGGVTLGA GTTLEITGAT
901 TVDNAVALTG AATIRTGADV LLSGAIGGAF ALTKTGTGAL ALSAANTHSG TFTISAGTVF
961 VTGTLASSAV VVSAGAVLGG TGTVTGPVTA AGTVAAGVAG VGVLTLSGGV TFQSGGTVAV
1021 DLNGSAAGTG YDQMATGPVV LTGATLSTVL GFAPSGGTNF VIINNTSGSP ITGTFNGLPE
1081 GATITIGGVL FTISYVGGTG NDVVLTIPLP RTVSIGDVTA SEGADGLTTF VFTVRLSGPV
1141 VVPVTVPYTT VGGTATAGTD FVSTTGTLTF APGVTELTIL VSVIGDPVPE SDEQFTVVLA
1201 GAANATIARG TATGTIADDD PPRIVIGVGT SGATAGIVQP VNPLTGALGE SVRPYVGFAG
1261 DVRVSSGDID GDGLIDMITG AGPGPMGGHV KVLDGRTGAD RFSFLAFEGF RGGVQVSTGD
1321 IDGDGHADII VAADAGAVPH VKVFSGLDGS LLRSFLAYDA GFRGGVRVSA ADVNGDGFDD
1381 VVTMSGVGSA PHLRVFSGAD GTDLVSALVA GRATGGLYVA AGDLDGDGRA EVVTGAGFGD
1441 PPIVNVYSGR DESVQKTFLA YLEGFVGGVR VGVEEVNGRA MILTGAGPGA GPHLCAFESD
1501 GGDPPLSMFV GSTDVHGGVY VG
//