LOCUS VTR94718.1 274 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana xylose isomerase : Xylose isomerase
domain-containing protein TIM barrel OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401
/ IFAM 1448) GN=Plabr_2087 PE=4 SV=1: AP_endonuc_2 protein.
ACCESSION LR593886-4019
PROTEIN_ID VTR94718.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_29960"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|F0SJB6|F0SJB6_PLABD ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Planctomyces
brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /
NBRC 103401 / IFAM 1448) GN=Plabr_2087 PE=4 SV=1 ;
EVALUE=1e-137 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6C3G5|A6C3G5_9PLAN ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Xylose
isomerase-like TIM barrel OS=Planctomyces maris DSM 8797
GN=PM8797T_26370 PE=4 SV=1 ; EVALUE=1e-134 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DA75|L0DA75_SINAD ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=Sugar phosphate
isomerase/epimerase OS=Singulisphaera acidiphila (strain
ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_1917 PE=4 SV=1 ; EVALUE=1e-132 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2R160|D2R160_PIRSD ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_3891 PE=4 SV=1
; EVALUE=1e-131 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D5SZ93|D5SZ93_PLAL2 ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_4185 PE=4 SV=1 ; EVALUE=1e-117 ;
Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B9XNE0|B9XNE0_PEDPL ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=Xylose isomerase
domain protein TIM barrel OS=Pedosphaera parvula (strain
Ellin514) GN=Cflav_PD1500 PE=4 SV=1 ; EVALUE=1e-112 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|Q1AYM5|Q1AYM5_RUBXD ;
ALN/Q_length_ratio=1.000 ; DESCRIPTION=Xylose
isomerase-like TIM barrel OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=Rxyl_0529 PE=4 SV=1 ;
EVALUE=4e-96 ; Q/S_length_ratio=0.975"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|X1F096|X1F096_9ZZZZ ;
ALN/Q_length_ratio=0.657 ; DESCRIPTION=Marine sediment
metagenome DNA, contig: S03H2_L07200 (Fragment) OS=marine
sediment metagenome GN=S03H2_22690 PE=4 SV=1 ;
EVALUE=4e-60 ; Q/S_length_ratio=1.522"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A0A072LT07|A0A072LT07_STRRM ;
ALN/Q_length_ratio=0.832 ; DESCRIPTION=Xylose isomerase
OS=Streptomyces rimosus R6-500 GN=V519_34800 PE=4 SV=1 ;
EVALUE=2e-36 ; Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|L8EDL1|L8EDL1_STRRM ;
ALN/Q_length_ratio=0.832 ; DESCRIPTION=Xylose isomerase
domain-containing protein TIM barrel OS=Streptomyces
rimosus subsp. rimosus ATCC 10970 GN=SRIM_42371 PE=4 SV=1
; EVALUE=4e-36 ; Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A079V5E4|A0A079V5E4_STRRM ;
ALN/Q_length_ratio=0.832 ; DESCRIPTION=Xylose isomerase
OS=Streptomyces rimosus GN=DF17_18805 PE=4 SV=1 ;
EVALUE=4e-36 ; Q/S_length_ratio=0.989"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|R5F5P0|R5F5P0_9CLOT ;
ALN/Q_length_ratio=0.536 ; DESCRIPTION=Uncharacterized
protein OS=Clostridium bolteae CAG:59 GN=BN723_04828 PE=4
SV=1 ; EVALUE=5e-15 ; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A8RXQ0|A8RXQ0_CLOBW ;
ALN/Q_length_ratio=0.536 ; DESCRIPTION=Uncharacterized
protein OS=Clostridium bolteae (strain ATCC BAA-613 / WAL
16351) GN=CLOBOL_04916 PE=4 SV=1 ; EVALUE=5e-15 ;
Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|R0CAM1|R0CAM1_9FIRM ;
ALN/Q_length_ratio=0.536 ; DESCRIPTION=Endonuclease
OS=[Clostridium] bolteae 90A5 GN=HMPREF1095_03779 PE=4
SV=1 ; EVALUE=5e-15 ; Q/S_length_ratio=0.986"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|R0BXZ1|R0BXZ1_9FIRM ;
ALN/Q_length_ratio=0.536 ; DESCRIPTION=Endonuclease
OS=[Clostridium] bolteae 90B7 GN=HMPREF1096_03333 PE=4
SV=1 ; EVALUE=5e-15 ; Q/S_length_ratio=0.986"
/note="Pfam_scan:hit_1 (21..220);
Pfam:PF01261.19:AP_endonuc_2;
Pfam_type:Domain;HMM_aln_Length:209; HMM_Length:213;
EVALUE:4.6e-28; BITSCORE: 97.9"
/note="GO_domain:GO:0016853"
BEGIN
1 MKLGLINSAW AQAGKGTAFG IQQTKAIGFD TIDIFADPLD TGAKERKLIR TECARADLPI
61 VSVACVAVGL VDFNPSVQRF HLGRCCAYLD FCYELGARNL LLVLGEYIWE RQVITPAEQW
121 KTGVEHLKTL GNYAANLGLD IALELEPFKL SLLSDVPNMV RFIDDVNHPA VRANIDISHL
181 QLAGARPEEL RALKGKAVHV HISDCDGKVH GDLPPGRGVV DFVPYLKEIA ALDIGGAISI
241 ELEYSPEPEK IVEWVTEAYR ATADLMQEAG IARE
//