LOCUS VTR94710.1 1104 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana wd-40 repeat protein : Uncultured bacterium
genome assembly Metasoil_fosmids_resub OS=uncultured bacterium
PE=4 SV=1: Sigma70_r2: Sigma70_r4_2: WD40: WD40: WD40
protein.
ACCESSION LR593886-4011
PROTEIN_ID VTR94710.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30040"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A090KPX2|A0A090KPX2_9BACT ;
ALN/Q_length_ratio=1.021 ; DESCRIPTION=Uncultured
bacterium genome assembly Metasoil_fosmids_resub
OS=uncultured bacterium PE=4 SV=1 ; EVALUE=1e-115 ;
Q/S_length_ratio=0.953"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|K9V395|K9V395_9CYAN ;
ALN/Q_length_ratio=0.531 ; DESCRIPTION=(Myosin
heavy-chain) kinase OS=Calothrix sp. PCC 6303
GN=Cal6303_2739 PE=4 SV=1 ; EVALUE=3e-68 ;
Q/S_length_ratio=0.692"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|X0KUP7|X0KUP7_FUSOX ;
ALN/Q_length_ratio=0.527 ; DESCRIPTION=Uncharacterized
protein OS=Fusarium oxysporum f. sp. vasinfectum 25433
GN=FOTG_18972 PE=4 SV=1 ; EVALUE=6e-64 ;
Q/S_length_ratio=1.238"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A0YMI4|A0YMI4_LYNSP ;
ALN/Q_length_ratio=0.521 ; DESCRIPTION=WD-40 repeat
protein OS=Lyngbya sp. (strain PCC 8106) GN=L8106_17667
PE=4 SV=1 ; EVALUE=1e-62 ; Q/S_length_ratio=0.807"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|E0UJ20|E0UJ20_CYAP2 ;
ALN/Q_length_ratio=0.527 ; DESCRIPTION=WD40 repeat,
subgroup OS=Cyanothece sp. (strain PCC 7822)
GN=Cyan7822_2631 PE=4 SV=1 ; EVALUE=1e-62 ;
Q/S_length_ratio=0.869"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B5VVI6|B5VVI6_ARTMA ;
ALN/Q_length_ratio=0.522 ; DESCRIPTION=WD-40 repeat
protein OS=Arthrospira maxima CS-328 GN=AmaxDRAFT_0527
PE=4 SV=1 ; EVALUE=1e-61 ; Q/S_length_ratio=1.332"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D7BXH8|D7BXH8_STRBB ;
ALN/Q_length_ratio=0.530 ; DESCRIPTION=Putative WD-40
repeat protein OS=Streptomyces bingchenggensis (strain
BCW-1) GN=SBI_04631 PE=4 SV=1 ; EVALUE=5e-61 ;
Q/S_length_ratio=0.853"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|B2IXC4|B2IXC4_NOSP7 ;
ALN/Q_length_ratio=0.524 ; DESCRIPTION=WD-40 repeat
protein OS=Nostoc punctiforme (strain ATCC 29133 / PCC
73102) GN=Npun_F1222 PE=4 SV=1 ; EVALUE=4e-60 ;
Q/S_length_ratio=0.911"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|F4XK01|F4XK01_9CYAN ;
ALN/Q_length_ratio=0.525 ; DESCRIPTION=WD-40
repeat-containing protein OS=Moorea producens 3L
GN=LYNGBM3L_10820 PE=4 SV=1 ; EVALUE=4e-60 ;
Q/S_length_ratio=0.757"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q3MCV7|Q3MCV7_ANAVT ;
ALN/Q_length_ratio=0.622 ; DESCRIPTION=Ribosome assembly
protein 4 (RSA4) OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=Ava_1556 PE=4 SV=1 ; EVALUE=2e-57 ;
Q/S_length_ratio=0.668"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|E4N1F8|E4N1F8_KITSK ;
ALN/Q_length_ratio=0.447 ; DESCRIPTION=Uncharacterized
protein OS=Kitasatospora setae (strain ATCC 33774 / DSM
43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054)
GN=KSE_62270 PE=4 SV=1 ; EVALUE=5e-57 ;
Q/S_length_ratio=0.795"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A084Y8X0|A0A084Y8X0_9CYAN ;
ALN/Q_length_ratio=0.522 ; DESCRIPTION=Uncharacterized
protein OS=Calothrix sp. 336/3 GN=IJ00_01065 PE=4 SV=1 ;
EVALUE=7e-57 ; Q/S_length_ratio=0.900"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0EB01|A0EB01_PARTE ;
ALN/Q_length_ratio=0.531 ; DESCRIPTION=Chromosome
undetermined scaffold_87, whole genome shotgun sequence
OS=Paramecium tetraurelia GN=GSPATT00025202001 PE=4 SV=1 ;
EVALUE=3e-56 ; Q/S_length_ratio=1.502"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|S9PCE9|S9PCE9_9DELT ;
ALN/Q_length_ratio=0.527 ; DESCRIPTION=Uncharacterized
protein OS=Cystobacter fuscus DSM 2262 GN=D187_009953 PE=4
SV=1 ; EVALUE=6e-56 ; Q/S_length_ratio=0.485"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|C7RS72|C7RS72_ACCPU ;
ALN/Q_length_ratio=0.531 ; DESCRIPTION=WD-40 repeat
protein OS=Accumulibacter phosphatis (strain UW-1)
GN=CAP2UW1_2609 PE=4 SV=1 ; EVALUE=9e-55 ;
Q/S_length_ratio=0.636"
/note="Pfam_scan:hit_1 (45..112);
Pfam:PF04542.9:Sigma70_r2;
Pfam_type:Domain;HMM_aln_Length:70; HMM_Length:71;
EVALUE:2.9e-08; BITSCORE: 33.1"
/note="Pfam_scan:hit_2 (136..189);
Pfam:PF08281.7:Sigma70_r4_2;
Pfam_type:Domain;HMM_aln_Length:51; HMM_Length:54;
EVALUE:3.1e-09; BITSCORE: 36.1"
/note="Pfam_scan:hit_3 (498..528); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:25; HMM_Length:39;
EVALUE:2.7e-05; BITSCORE: 23.8"
/note="Pfam_scan:hit_4 (862..884); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:21; HMM_Length:39;
EVALUE:0.00021; BITSCORE: 21.0"
/note="Pfam_scan:hit_5 (889..926); Pfam:PF00400.27:WD40;
Pfam_type:Repeat;HMM_aln_Length:34; HMM_Length:39;
EVALUE:8.8e-10; BITSCORE: 38.0"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0000988"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MARDVPRGLA HHIRDLTGLW RADPRTDGEL LSAFADGDEG AFAALVVRHG KPVWATCLRV
61 LGNEADAEDA FQATFIALAR KATQIRAESV AGWLQKVSRE VALNARKAAQ RRDAAQSRLH
121 ERAVPQTDET PDEELRAAVA DEMSHLPERL RVPLTLYYVE GKTQAEVGRI LGVTDRAAAH
181 RLKQGVKLLR DRLARRGVAV AASVLAAVLG NVPVAVAVPK GLVAHTTEVA LAIAAGAPAQ
241 TAAAQLALSV TQTTVWTRLK LCSLLLIPAL STIVGAVFLS QRPSQAAPES PASRPVDATT
301 EGGRTDRFGD PLPEGALSRL GTLRFRTGNP GGISNVAFGP GGKSLISAHG ADSVHFWEPE
361 TGREVRKIDA PTSCWSVSAS RDGKRLVGVG IKEVWAWDLS GAEPKVLWKV PSKSPGPSTV
421 EFSPDGKLVA CGGDSGREIR LLDAATGTAA QTLIGRGCRF AFTADSKRLA SWTWSPMAEV
481 SVWDLATGAR QHTLTAGVDK EIVSSVAFSA DGKTLVTAGQ DRRLRVWDAE KGTETRKLAE
541 DAAPHAFVNF AADGRTLIEV GNGQIRFWNP ETGRAAKPAI KTSESAWSTA YRLSPDGARA
601 ATAWPFGVGL WDIATGRELG AVAGMPDGFM HPVVFSRDGS TLATAAYSEA AGSTVHVWDA
661 ADGRLRRQFA LAQRQMVWGI DLSGDGTLST SVGELVELPP KPPEKITRWD AATGKGHADL
721 RLPAETRSVA FAPEGKFVAV AGPTGVALFD RGTGREVKKL SDQCKAESMA FSADGKTLAA
781 LEQGATRVTI WSLPEGREQH WPPPRNANRQ QFRAPVALSA DGRMLAVGGA EPQSNIRVID
841 LATGTDLLPL DGRTFGWAFQ EFAFAPDGRT LASAGSDGVV RVWEIVSARE RYKFTGHRAS
901 ILGVAFSPDG RRLASSSMDS TVLVWDLTAP QQPASAARAT ADQLWSALSG TDAAAAHRAI
961 ATLAAAPDTS VPFLKQRLGT APASAEQVQQ WIADLGSDQF AMREAATKEL AQHASQLEGE
1021 LRSALASTTS AEARARLKNL VAGIGPSSPA NRAAVRGVEA LEQMKNDSAA KKLLQELAKL
1081 PADSATGREA RSACRRLAGP LPGR
//