LOCUS VTR94677.1 142 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana transcription antitermination protein
: N utilization substance protein B homolog OS=Rhodopirellula
sp. SWK7 GN=nusB PE=3 SV=1: NusB protein.
ACCESSION LR593886-3978
PROTEIN_ID VTR94677.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30370"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5TEZ3|M5TEZ3_9PLAN ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula sp. SWK7
GN=nusB PE=3 SV=1 ; EVALUE=1e-34 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|D2R650|D2R650_PIRSD ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=N utilization
substance protein B homolog OS=Pirellula staleyi (strain
ATCC 27377 / DSM 6068 / ICPB 4128) GN=nusB PE=3 SV=1 ;
EVALUE=8e-34 ; Q/S_length_ratio=1.044"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DPS2|L0DPS2_SINAD ;
ALN/Q_length_ratio=0.944 ; DESCRIPTION=N utilization
substance protein B homolog OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=nusB PE=3 SV=1 ; EVALUE=3e-33 ; Q/S_length_ratio=0.673"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5UF78|M5UF78_9PLAN ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula sallentina
SM41 GN=nusB PE=3 SV=1 ; EVALUE=5e-33 ;
Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A3ZQQ5|A3ZQQ5_9PLAN ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Blastopirellula marina DSM
3645 GN=nusB PE=3 SV=1 ; EVALUE=3e-32 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_6 ; ACCESSION=A1ANJ5 ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=N utilization
substance protein B homolog OS=Pelobacter propionicus
(strain DSM 2379) GN=nusB PE=3 SV=1 ; EVALUE=8e-32 ;
Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F0SGU4|F0SGU4_PLABD ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=N utilization
substance protein B homolog OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=nusB PE=3 SV=1 ; EVALUE=1e-31 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M2AMC8|M2AMC8_9PLAN ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula europaea 6C
GN=nusB PE=3 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5S9U3|M5S9U3_9PLAN ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula maiorica SM1
GN=nusB PE=3 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_14 ; ACCESSION=Q7USA9 ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula baltica
(strain SH1) GN=nusB PE=3 SV=1 ; EVALUE=2e-31 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5DKW1|K5DKW1_RHOBT ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula baltica SH28
GN=nusB PE=3 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L7CPD6|L7CPD6_RHOBT ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula baltica
SWK14 GN=nusB PE=3 SV=1 ; EVALUE=2e-31 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5SGL8|M5SGL8_9PLAN ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula europaea
SH398 GN=nusB PE=3 SV=1 ; EVALUE=2e-31 ;
Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|F2ATK4|F2ATK4_RHOBT ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Rhodopirellula baltica WH47
GN=nusB PE=3 SV=1 ; EVALUE=2e-31 ; Q/S_length_ratio=0.979"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|S4YCM7|S4YCM7_SORCE ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=N utilization
substance protein B homolog OS=Sorangium cellulosum
So0157-2 GN=nusB PE=3 SV=1 ; EVALUE=8e-31 ;
Q/S_length_ratio=1.014"
/note="Pfam_scan:hit_1 (5..134); Pfam:PF01029.13:NusB;
Pfam_type:Domain;HMM_aln_Length:130; HMM_Length:134;
EVALUE:1.9e-37; BITSCORE: 128.2"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
BEGIN
1 MARRSRAREV ALQLLFQWDQ NPTPVPRKAI KTFVRDRLLA DAEMEAYTLK LVDGVVARKE
61 EIDENLKAAA TNWRLSRMTP VDRNVLRLGT YELLFDTTQP PLEVVINEAI ELARRFGSED
121 SPAFVNGVLD RVGAMKKEKG KA
//