LOCUS VTR94659.1 448 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana excinuclease abc subunit c : UvrABC
system protein C OS=Blastopirellula marina DSM 3645 GN=
DSM3645_06771 PE=4 SV=1: GIY-YIG: UVR: UvrC_HhH_N protein.
ACCESSION LR593886-3960
PROTEIN_ID VTR94659.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30550"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|F2AR82|F2AR82_RHOBT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula baltica WH47 GN=RBWH47_04395
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q7UPD6|Q7UPD6_RHOBA ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula baltica (strain SH1) GN=uvrC
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5RLR3|M5RLR3_9PLAN ;
ALN/Q_length_ratio=0.946 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula maiorica SM1 GN=RMSM_06781
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.943"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M5S9T8|M5S9T8_9PLAN ;
ALN/Q_length_ratio=0.951 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula europaea SH398 GN=RESH_01211
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5DJC9|K5DJC9_RHOBT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula baltica SH28 GN=RBSH_02187
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F0SRE9|F0SRE9_PLABD ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=UvrABC system
protein C OS=Planctomyces brasiliensis (strain ATCC 49424
/ DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_0383 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.903"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|M5TD45|M5TD45_9PLAN ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula sp. SWK7 GN=RRSWK_00710 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|L0DM80|L0DM80_SINAD ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=UvrABC system
protein C OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_5821
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.974"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D2R0D2|D2R0D2_PIRSD ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=UvrABC system
protein C OS=Pirellula staleyi (strain ATCC 27377 / DSM
6068 / ICPB 4128) GN=Psta_0104 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.909"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|D5SZ23|D5SZ23_PLAL2 ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=UvrABC system
protein C OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=Plim_4113 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L7CLA8|L7CLA8_RHOBT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula baltica SWK14 GN=RBSWK_01054
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5TVX3|M5TVX3_9PLAN ;
ALN/Q_length_ratio=0.940 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula sallentina SM41 GN=RSSM_05207
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.052"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A6C0Z5|A6C0Z5_9PLAN ;
ALN/Q_length_ratio=0.993 ; DESCRIPTION=UvrABC system
protein C OS=Planctomyces maris DSM 8797 GN=PM8797T_05435
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M2AYB9|M2AYB9_9PLAN ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=UvrABC system
protein C OS=Rhodopirellula europaea 6C GN=RE6C_04935 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A3ZYD1|A3ZYD1_9PLAN ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=UvrABC system
protein C OS=Blastopirellula marina DSM 3645
GN=DSM3645_06771 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.978"
/note="Pfam_scan:hit_1 (29..106); Pfam:PF01541.19:GIY-YIG;
Pfam_type:Domain;HMM_aln_Length:78; HMM_Length:80;
EVALUE:1.8e-07; BITSCORE: 31.4"
/note="Pfam_scan:hit_2 (222..257); Pfam:PF02151.14:UVR;
Pfam_type:Family;HMM_aln_Length:33; HMM_Length:36;
EVALUE:2.2e-08; BITSCORE: 33.3"
/note="Pfam_scan:hit_3 (283..434);
Pfam:PF08459.6:UvrC_HhH_N;
Pfam_type:Family;HMM_aln_Length:153; HMM_Length:155;
EVALUE:2.6e-51; BITSCORE: 173.2"
/note="GO_domain:GO:0003674"
BEGIN
1 MIEDPIPPVS EQTPDPRDPA AKVREFPTTS GVYLMKDAGG NVIYVGKAKN LRGRASSYFS
61 KEALNDARIR DWMPLVKDVD FIETTDAIQA VFTEARMIKD LRPKFNKDLK DDKTFPYLQI
121 RTREEFPRVE ITRKPRRKGV RLYGPFTSTK PLRIAMDVLQ RLLQFRTCSL DIKTGEDRWK
181 WFRPCLLHSI RRCTAPCNLR VSREDYRAQI KKLIFILEGK TAKLVRRMER EMIAASEELN
241 FEKARRIRDE IAAIQKLDMR GDASKDVQPE VFPIDPKKGL IGLKKVLGLA NTPRTIEGMD
301 IAHLSGQDTV ASLVSFLDGV PFKPGYRRFK IKSVEGVDDF ASMREVVTRR FRRLRDEDEV
361 FPDILLIDGG KGQLNAAIDA FQTLGITPPC LISLAKQEEE IFRPGAEESI KLSKHSAALR
421 LLQYVRDESH RFAQHYHHML RRKRFTED
//