LOCUS VTR94651.1 344 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana cytochrome c biogenesis protein : 1-
aminocyclopropane-1-carboxylate deaminase OS=Thermomicrobium
roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=trd_1612
PE=4 SV=1: PALP protein.
ACCESSION LR593886-3952
PROTEIN_ID VTR94651.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30630"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|B9L0B9|B9L0B9_THERP ;
ALN/Q_length_ratio=0.942 ;
DESCRIPTION=1-aminocyclopropane-1-carboxylate deaminase
OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 /
P-2) GN=trd_1612 PE=4 SV=1 ; EVALUE=2e-65 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A0A0D9L0|A0A0A0D9L0_9PROT ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=Uncharacterized
protein OS=Inquilinus limosus MP06 GN=P409_08120 PE=4 SV=1
; EVALUE=4e-62 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|F5Y4I4|F5Y4I4_RAMTT ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=Candidate
D-cysteine desulfhydrase OS=Ramlibacter tataouinensis
(strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310)
GN=dcyD PE=4 SV=1 ; EVALUE=2e-61 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B9R308|B9R308_9RHOB ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Pyridoxal
phosphate-dependent enzyme, D-cysteine desulfhydrase
family OS=Labrenzia alexandrii DFL-11 GN=SADFL11_2239 PE=4
SV=1 ; EVALUE=5e-61 ; Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A0A0DAC8|A0A0A0DAC8_9PROT ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Cytochrome C
biogenesis protein CcmE OS=Inquilinus limosus MP06
GN=P409_13175 PE=4 SV=1 ; EVALUE=2e-60 ;
Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A3JTI9|A3JTI9_9RHOB ;
ALN/Q_length_ratio=1.023 ; DESCRIPTION=D-cysteine
desulfhydrase OS=Rhodobacteraceae bacterium HTCC2150
GN=RB2150_17689 PE=4 SV=1 ; EVALUE=2e-60 ;
Q/S_length_ratio=0.945"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6FPF8|A6FPF8_9RHOB ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=D-cysteine
desulfhydrase OS=Roseobacter sp. AzwK-3b GN=RAZWK3B_18623
PE=4 SV=1 ; EVALUE=3e-60 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A8LJF9|A8LJF9_DINSH ;
ALN/Q_length_ratio=0.945 ; DESCRIPTION=Pyridoxal
phosphate-dependent enzyme OS=Dinoroseobacter shibae
(strain DSM 16493 / NCIMB 14021 / DFL 12) GN=Dshi_1439
PE=4 SV=1 ; EVALUE=7e-59 ; Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|R9PPY4|R9PPY4_AGAAL ;
ALN/Q_length_ratio=0.924 ;
DESCRIPTION=1-aminocyclopropane-1-carboxylate deaminase
OS=Agarivorans albus MKT 106 GN=AALB_3408 PE=4 SV=1 ;
EVALUE=7e-59 ; Q/S_length_ratio=1.058"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|X0QND3|X0QND3_9GAMM ;
ALN/Q_length_ratio=0.924 ;
DESCRIPTION=1-aminocyclopropane-1-carboxylate deaminase
OS=Psychrobacter sp. JCM 18902 GN=JCM18902_1102 PE=4 SV=1
; EVALUE=1e-58 ; Q/S_length_ratio=1.055"
/note="BLAST_uniprot:hit_12 ; ACCESSION=Q5LL69 ;
ALN/Q_length_ratio=0.939 ; DESCRIPTION=L-cysteate
sulfo-lyase OS=Ruegeria pomeroyi (strain ATCC 700808 / DSM
15171 / DSS-3) GN=cuyA PE=1 SV=1 ; EVALUE=3e-58 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K2JR53|K2JR53_9PROT ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=D-cysteine
desulfhydrase OS=Oceanibaculum indicum P24 GN=P24_13208
PE=4 SV=1 ; EVALUE=3e-58 ; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A3SQG3|A3SQG3_9RHOB ;
ALN/Q_length_ratio=0.936 ; DESCRIPTION=D-cysteine
desulfhydrase OS=Roseovarius nubinhibens ISM GN=ISM_09626
PE=4 SV=1 ; EVALUE=4e-58 ; Q/S_length_ratio=1.018"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|H5TE68|H5TE68_9ALTE ;
ALN/Q_length_ratio=0.924 ; DESCRIPTION=D-cysteine
desulfhydrase OS=Glaciecola punicea DSM 14233 = ACAM 611
GN=dcyD PE=4 SV=1 ; EVALUE=8e-58 ; Q/S_length_ratio=1.021"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|E0MNK2|E0MNK2_9RHOB ;
ALN/Q_length_ratio=0.948 ; DESCRIPTION=D-cysteine
desulfhydrase OS=Ahrensia sp. R2A130 GN=R2A130_3011 PE=4
SV=1 ; EVALUE=1e-57 ; Q/S_length_ratio=0.991"
/note="Pfam_scan:hit_1 (21..328); Pfam:PF00291.20:PALP;
Pfam_type:Family;HMM_aln_Length:302; HMM_Length:306;
EVALUE:9.1e-26; BITSCORE: 90.7"
/note="GO_domain:GO:0003674"
BEGIN
1 MPVPTLTPAE VRAAAAQLPR ERLAHLPTPL EEMPRFAAKI GGGVRIFIKR DDCTGLVLGG
61 NKARHNEFLL GDAVASGADM FVWGALVQSN NCRQTAASCA KLGLECRLYL SKAHQKTEPQ
121 GNLLLDYLVG AHVEFTDAKI GPELNALLAS KAEEFRRAGR NPYFWNPPRV VPLAAVSYAL
181 CMAEIAEQLT ALNVNPAAFY VSSAGATGAG VALGKALLGF QCPARLICPM PWPWHIPTRM
241 AEDANAAAER LGLPHRLAPE DLDADESFIA PGYGLPSRAG QEAMHLLATT EAILTDHVYT
301 AKALAALIAD VRAGKYSRGS SVVFIHTGGV PAIFAEPDKV LPGM
//