LOCUS VTR94646.1 647 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna topoisomerase iv subunit b : DNA
gyrase subunit B OS=uncultured planctomycete GN=HGMM_F22C11C07
PE=3 SV=1: HATPase_c: DNA_gyraseB: Toprim: DNA_gyraseB_C
protein.
ACCESSION LR593886-3947
PROTEIN_ID VTR94646.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30680"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D5SN31|D5SN31_PLAL2 ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_0105 PE=3 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.019"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SMG2|F0SMG2_PLABD ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=DNA topoisomerase
IV subunit B OS=Planctomyces brasiliensis (strain ATCC
49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448)
GN=Plabr_0094 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.013"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A084SVH8|A0A084SVH8_9DELT ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=DNA topoisomerase
OS=Cystobacter violaceus Cb vi76 GN=Q664_15130 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|S4XJ64|S4XJ64_SORCE ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=DNA topoisomerase
OS=Sorangium cellulosum So0157-2 GN=SCE1572_27195 PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F8CBV9|F8CBV9_MYXFH ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Type II DNA
topoisomerase subunit B OS=Myxococcus fulvus (strain ATCC
BAA-855 / HW-1) GN=LILAB_20115 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5U864|M5U864_9PLAN ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=DNA topoisomerase
IV subunit B OS=Rhodopirellula sallentina SM41
GN=RSSM_01079 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.011"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7U8M2|L7U8M2_MYXSD ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Type II DNA
topoisomerase subunit B OS=Myxococcus stipitatus (strain
DSM 14675 / JCM 12634 / Mx s8) GN=MYSTI_02869 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|E3FVB6|E3FVB6_STIAD ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=Type II DNA
topoisomerase, B subunit OS=Stigmatella aurantiaca (strain
DW4/3-1) GN=STAUR_3150 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M5S9F5|M5S9F5_9PLAN ;
ALN/Q_length_ratio=0.974 ; DESCRIPTION=DNA gyrase subunit
B OS=Rhodopirellula maiorica SM1 GN=RMSM_00279 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.016"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|U2S011|U2S011_9DELT ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Topoisomerase IV
subunit B protein OS=Myxococcus sp. (contaminant ex DSM
436) GN=A176_06681 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A6CC20|A6CC20_9PLAN ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=DNA gyrase subunit
B OS=Planctomyces maris DSM 8797 GN=PM8797T_08834 PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|Q1D9H0|Q1D9H0_MYXXD ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Type II DNA
topoisomerase, B subunit OS=Myxococcus xanthus (strain DK
1622) GN=MXAN_2483 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.006"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|S9P8J7|S9P8J7_9DELT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Topoisomerase IV
subunit B OS=Cystobacter fuscus DSM 2262 GN=D187_003760
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A9F3U4|A9F3U4_SORC5 ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=DNA gyrase subunit
B OS=Sorangium cellulosum (strain So ce56) GN=gyrB PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SFQ6|H5SFQ6_9BACT ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=DNA gyrase subunit
B OS=uncultured planctomycete GN=HGMM_F22C11C07 PE=3 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.019"
/note="Pfam_scan:hit_1 (37..183);
Pfam:PF02518.21:HATPase_c;
Pfam_type:Domain;HMM_aln_Length:107; HMM_Length:111;
EVALUE:2e-14; BITSCORE: 53.2"
/note="Pfam_scan:hit_2 (229..399);
Pfam:PF00204.20:DNA_gyraseB;
Pfam_type:Domain;HMM_aln_Length:171; HMM_Length:173;
EVALUE:3.6e-46; BITSCORE: 156.5"
/note="Pfam_scan:hit_3 (428..540); Pfam:PF01751.17:Toprim;
Pfam_type:Family;HMM_aln_Length:97; HMM_Length:100;
EVALUE:8.8e-22; BITSCORE: 76.9"
/note="Pfam_scan:hit_4 (569..634);
Pfam:PF00986.16:DNA_gyraseB_C;
Pfam_type:Family;HMM_aln_Length:63; HMM_Length:65;
EVALUE:4.6e-21; BITSCORE: 74.3"
/note="GO_domain:GO:0016887"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0051276"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.3"
/note="Enzyme_Code:EC:5.99.1"
/note="Enzyme_Code:EC:5.99.1.3"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MSALTAGRAA AYRTEDIQVL EGLEPVRKRP AMYIGGVDGK GLHHLTWEIL DNAVDEYING
61 FADHITITLH KSGHAITVTD NGRGIPIDMH PKHKKTGLEL VLTVLHAGGK FGESDSGYIN
121 SGGLHGVGAS VVNALSKKLV ATVRRDGFEY RQEYANGTPL AKLEKVGPFR GHGTSIYFEP
181 DDTIFKTVRF DPDTIKARLE DTSFVHSGLK ITYKNEISGE TVELANPGGL PAFLTKLVRD
241 GQKPTVTEAA FAAARETGDR IEVALQWTES TDEVYRSYAN GIRTPQGGTH ENGLKSALRK
301 AVTSYIDTHD IKVKGLKITA DDIREGVVAV LSVFLRDPMF QSQTKDKLTN TEMENAVDNF
361 VRPALEAWLN NNKTAADAIV GRIVIAARMR EASRAAKEEV KRKAPGSKRL SLPGKLADCK
421 STDRDETELF IVEGDSAGGS AKQGRNNNTQ AVLPLRGKIL NCEGLGAAKV LTNQEIADLV
481 TAIGTGIGEK FNYGNLRYGK IILLMDADAD GCHITTLMLD FLFRHMRSLI DQGHVFIGQP
541 PLYRVNVGKD IHWVQNDQAK EELLEKLQKA NRKFEVTRFK GLGEMDARDL AATTLDRRTR
601 TLLKVKVEGD YLETDRTFVD LLGKDAAARY KFIMERAEQT VAEELDV
//