LOCUS VTR94645.1 784 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna topoisomerase : DNA topoisomerase
(ATP-hydrolyzing) OS=uncultured planctomycete GN=HGMM_F22C11C08
PE=4 SV=1: DNA_topoisoIV: DNA_gyraseA_C: DNA_gyraseA_C:
DNA_gyraseA_C protein.
ACCESSION LR593886-3946
PROTEIN_ID VTR94645.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30690"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6CC19|A6CC19_9PLAN ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Planctomyces maris DSM 8797
GN=PM8797T_08829 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.978"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SMG1|F0SMG1_PLABD ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Planctomyces brasiliensis (strain
ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM
1448) GN=Plabr_0093 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.999"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7U5P1|L7U5P1_MYXSD ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Myxococcus stipitatus (strain DSM
14675 / JCM 12634 / Mx s8) GN=MYSTI_02870 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.994"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A017T7L6|A0A017T7L6_9DELT ;
ALN/Q_length_ratio=0.971 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Chondromyces apiculatus DSM 436
GN=CAP_3403 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A6FX31|A6FX31_9DELT ;
ALN/Q_length_ratio=0.983 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Plesiocystis pacifica SIR-1
GN=PPSIR1_05293 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|G2SF22|G2SF22_RHOMR ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Rhodothermus marinus SG0.5JP17-172
GN=Rhom172_1316 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A9F3U1|A9F3U1_SORC5 ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Sorangium cellulosum (strain So ce56)
GN=sce4451 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D0MI54|D0MI54_RHOM4 ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Rhodothermus marinus (strain ATCC
43812 / DSM 4252 / R-10) GN=Rmar_1272 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.012"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0A085XWU0|A0A085XWU0_9DELT ;
ALN/Q_length_ratio=0.954 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Sandaracinus amylolyticus
GN=DB32_3288 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.943"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|S4XPL9|S4XPL9_SORCE ;
ALN/Q_length_ratio=0.954 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Sorangium cellulosum So0157-2
GN=SCE1572_27190 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.980"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SN32|D5SN32_PLAL2 ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Planctomyces limnophilus (strain ATCC
43296 / DSM 3776 / IFAM 1008 / 290) GN=Plim_0106 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|U2SJ91|U2SJ91_9DELT ;
ALN/Q_length_ratio=0.938 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Myxococcus sp. (contaminant ex DSM
436) GN=A176_06682 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.991"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|H8N0U2|H8N0U2_CORCM ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Corallococcus coralloides (strain
ATCC 25202 / DSM 2259 / NBRC 100086 / M2) GN=gyrA1 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.990"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|D0LGV8|D0LGV8_HALO1 ;
ALN/Q_length_ratio=0.946 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=Haliangium ochraceum (strain DSM
14365 / JCM 11303 / SMP-2) GN=Hoch_2135 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.996"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|H5SFQ7|H5SFQ7_9BACT ;
ALN/Q_length_ratio=1.009 ; DESCRIPTION=DNA topoisomerase
(ATP-hydrolyzing) OS=uncultured planctomycete
GN=HGMM_F22C11C08 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.979"
/note="Pfam_scan:hit_1 (29..479);
Pfam:PF00521.15:DNA_topoisoIV;
Pfam_type:Family;HMM_aln_Length:420; HMM_Length:426;
EVALUE:1.1e-131; BITSCORE: 439.5"
/note="Pfam_scan:hit_2 (553..601);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:45; HMM_Length:48;
EVALUE:2.3; BITSCORE: 7.5"
/note="Pfam_scan:hit_3 (619..665);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:42; HMM_Length:48;
EVALUE:0.0025; BITSCORE: 17.0"
/note="Pfam_scan:hit_4 (668..714);
Pfam:PF03989.8:DNA_gyraseA_C;
Pfam_type:Repeat;HMM_aln_Length:37; HMM_Length:48;
EVALUE:2.3e-05; BITSCORE: 23.6"
/note="GO_domain:GO:0016887"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0051276"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0005694"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0016853"
/note="Enzyme_Code:EC:3.6.1"
/note="Enzyme_Code:EC:3.6.1.3"
/note="Enzyme_Code:EC:5.99.1"
/note="Enzyme_Code:EC:5.99.1.3"
/note="Enzyme_Code:EC:3.6.1.15"
BEGIN
1 MAESIETVSI ASEVRTRFLT YAMSVVSGRA LPDVRDGLKP VQRRILYAMS NDLNLSFDRK
61 ALKCAKIVGE VMGNYHPHGD SALYEALVRM SQNWVLRVPL VYGQGNFGSV DGDPPAAYRY
121 TEAKLTRQAE MLLDELGQQT VDFNPSYDGT RQEPSVLPAQ FPNLLVNGTA GIAVGMATQI
181 PPHNLGEVLR GCVLLIDNPD ASVANLLDKI KGPDFPLGGK ILADRATLRK IYEEGTGTIK
241 VQAEWKEEEY ERGKSQIVVT SIPYGVNKGD LENTIGAIID QRKLPQLTGQ ANESNEKDGL
301 RLVLEVKAGT DPNLVMAYLY KHTELQKSFS YNVTALVPNE DGTRMVPKDG LSLKDLLRHF
361 LDFRLATVRR RYEYHLRQLR KRIHILEGFA IIFNALDRAI KIIRESSGKS DAAEKLKSTF
421 KLDDEQVGAI LDSQLYKIAQ MEIKKILDEL AEKKKQAKEF EAILASEKKL WGVIKGELEK
481 LIENFPERRK TRMASDEDVL TFDEEAYIVR ENTNVVLTRN GRIKRVGRLA AVESTRVEEG
541 DEVVAVIPGS TLDHVAFFAD DGAAYTMRIN EVPATAGYGE PITKFFKLGD GVKVVAAVTS
601 DPRFTPADAA PKGDTPGGPF LLVCTRNGFV LRLPLTAFRT ESTKVGRRFV KLETGDKVVM
661 VRLVGAEESL MLATAGGYVT HFPLDQVSIL SGAGRGVIGI ELDPKDDCLG GILVGGRFDK
721 LVVETENGKT QDFGPGAIKS RKRGAKGEKP GARTKFTRVV PTPIELADWD VVEGKKTKDD
781 AKSD
//