LOCUS VTR94637.1 844 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dead deah box helicase domain protein
: DEAD/DEAH box helicase domain protein OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=Psta_1777
PE=4 SV=1: DEAD: Helicase_C protein.
ACCESSION LR593886-3938
PROTEIN_ID VTR94637.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30770"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M5THU2|M5THU2_9PLAN ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Rhodopirellula sp. SWK7
GN=RRSWK_04318 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.001"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|F0SGC3|F0SGC3_PLABD ;
ALN/Q_length_ratio=0.942 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Planctomyces brasiliensis
(strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 /
IFAM 1448) GN=Plabr_2923 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.054"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M5RV10|M5RV10_9PLAN ;
ALN/Q_length_ratio=0.787 ; DESCRIPTION=DEAD/DEAH box
helicase domain-containing protein (Fragment)
OS=Rhodopirellula maiorica SM1 GN=RMSM_00013 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.254"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|M2A4A4|M2A4A4_9PLAN ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Rhodopirellula europaea 6C
GN=RE6C_04793 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.956"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|M5ULH8|M5ULH8_9PLAN ;
ALN/Q_length_ratio=0.963 ; DESCRIPTION=DEAD/DEAH box
helicase domain-containing protein OS=Rhodopirellula
sallentina SM41 GN=RSSM_01679 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.001"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|L7CHF5|L7CHF5_RHOBT ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Rhodopirellula baltica SWK14
GN=RBSWK_02623 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|I0IIB4|I0IIB4_PHYMF ;
ALN/Q_length_ratio=0.979 ; DESCRIPTION=Putative
ATP-dependent helicase OS=Phycisphaera mikurensis (strain
NBRC 102666 / KCTC 22515 / FYK2301M01) GN=PSMK_28430 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q7UNW6|Q7UNW6_RHOBA ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Putative helicase
OS=Rhodopirellula baltica (strain SH1) GN=RB7301 PE=4 SV=1
; EVALUE=0.0 ; Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|K5E1C5|K5E1C5_RHOBT ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Rhodopirellula baltica SH28
GN=RBSH_05128 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D5SUM7|D5SUM7_PLAL2 ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Planctomyces limnophilus
(strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290)
GN=Plim_1245 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.999"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|L0DNW3|L0DNW3_SINAD ;
ALN/Q_length_ratio=0.618 ; DESCRIPTION=Superfamily II RNA
helicase OS=Singulisphaera acidiphila (strain ATCC
BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) GN=Sinac_6273
PE=4 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.113"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|H5S870|H5S870_9BACT ;
ALN/Q_length_ratio=0.626 ; DESCRIPTION=Helicase
OS=uncultured planctomycete GN=HGMM_F01A04C03 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.051"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5SCH6|M5SCH6_9PLAN ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Rhodopirellula europaea SH398
GN=RESH_00318 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D2QYZ7|D2QYZ7_PIRSD ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Pirellula staleyi (strain ATCC
27377 / DSM 6068 / ICPB 4128) GN=Psta_1777 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|F2AZR3|F2AZR3_RHOBT ;
ALN/Q_length_ratio=0.666 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Rhodopirellula baltica WH47
GN=RBWH47_05299 PE=4 SV=1 ; EVALUE=1e-136 ;
Q/S_length_ratio=1.411"
/note="Pfam_scan:hit_1 (23..183); Pfam:PF00270.24:DEAD;
Pfam_type:Domain;HMM_aln_Length:164; HMM_Length:169;
EVALUE:4.9e-16; BITSCORE: 58.6"
/note="Pfam_scan:hit_2 (284..368);
Pfam:PF00271.26:Helicase_C;
Pfam_type:Family;HMM_aln_Length:67; HMM_Length:78;
EVALUE:3.5e-05; BITSCORE: 23.5"
/note="GO_domain:GO:0043167"
BEGIN
1 MSASDTRSDL ATKYIDQLPY PPYPVQEEAL LAWFTAEQGV MVCAPTGTGK TLIAHAALFE
61 ALHTNTVAYY TTPLIALTEQ KFAEVQAAAV RWGFKAEDVG LVTGNRRVNP NARVLIVVAE
121 ILLNRLLHAE GFDFQHTSAV VMDEFHSFAD PERGIVWELS LNMLPKHIRL LLLSATVGNA
181 VEFTNWLDRC HGRQLELVEG RERKIPLTYR WVPDQFLNEL LVDIAKGDDA TRKTPALVFA
241 FNRDECWNVA EQLKGLDLMN AAQKTALNKE CDKLDWPNGV GPKLKQMLRR GVGVHHAGLL
301 PKYRRVVEEL FEKKLLSVAL CTETLAAGIN LPARSVVLTS LVKGPFGKEK LIDPSTAHQI
361 FGRAGRPQYD TEGYVFAYPE EDDVRILRWK QQYDQIPENT KNPGLLKAKK ALLKKKPTRN
421 SQKKYWTEAD FERLKSAPAG RLYSKGPLPW RLLAYLLKVS PDVEKIRSVV RKRLLDQPRI
481 EAGMKQLTRM LTTLHENGFV KLDPEPPSKE EPTPSPPSPE GKEKKEQPNP LTPFPKKEGG
541 TKPSVVLSPS PFGGGVGEGL FHPPFPSGRG DGGVGSSPPP PPYTPLTATP TPELDKLLVF
601 RACHPLYGAF LIDLLGVANR EERLQLLESV LELPRPLLKF VRVPFDLSPG PLQTEKLDPE
661 LIAKGLIVAK APKAEGEEEE EEEWVPWDER PPVLADKARM LFDSKYPEVG DFMTQGVWAA
721 AEVLNYGNFN TYVTTKDLTK QEGLIFRHML RLILLTQEFE QLTPPGLTPE DWKKELAEIA
781 DKLTEICRTV DPTSTEEAIK RAHGADVVEG EEHAKVVTAK APEPAPPTGM TVEEEEDFSA
841 GLAD
//