LOCUS VTR94634.1 562 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana heavy metal transporter : DEAD/DEAH
box helicase domain protein OS=Actinosynnema mirum (strain
ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) GN=Amir_2267
PE=3 SV=1: DEAD: Helicase_C: DbpA protein.
ACCESSION LR593886-3935
PROTEIN_ID VTR94634.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_30800"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|D2B0Z2|D2B0Z2_STRRD ;
ALN/Q_length_ratio=0.986 ; DESCRIPTION=ATP-independent RNA
helicase OS=Streptosporangium roseum (strain ATCC 12428 /
DSM 43021 / JCM 3005 / NI 9100) GN=Sros_0368 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.002"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|K0K0Z0|K0K0Z0_SACES ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Cold-shock DEAD box
protein A OS=Saccharothrix espanaensis (strain ATCC 51144
/ DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) GN=deaD
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.967"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C4RDR9|C4RDR9_9ACTO ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=DEAD/DEAH box
helicase domain-containing protein OS=Micromonospora sp.
ATCC 39149 GN=MCAG_00332 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.976"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|I0H3A3|I0H3A3_ACTM4 ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Putative RNA
helicase OS=Actinoplanes missouriensis (strain ATCC 14538
/ DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC
102363 / 431) GN=AMIS_22700 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|F4F9Q2|F4F9Q2_VERMA ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=DEAD/DEAH box
helicase domain-containing protein OS=Verrucosispora maris
(strain AB-18-032) GN=VAB18032_23650 PE=3 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=0.993"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|Q0RTL3|Q0RTL3_FRAAA ;
ALN/Q_length_ratio=0.980 ; DESCRIPTION=Cold-shock DeaD box
ATP-dependent RNA helicase OS=Frankia alni (strain ACN14a)
GN=deaD PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=0.924"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A0A6U9H7|A0A0A6U9H7_ACTUT ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Heavy metal
transporter OS=Actinoplanes utahensis GN=MB27_42840 PE=4
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.004"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|H6RV05|H6RV05_BLASD ;
ALN/Q_length_ratio=0.973 ; DESCRIPTION=ATP-dependent RNA
helicase, Cold-shock DEAD box protein A OS=Blastococcus
saxobsidens (strain DD2) GN=deaD2 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.022"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|D9TES5|D9TES5_MICAI ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Micromonospora aurantiaca
(strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 /
INA 9442) GN=Micau_3431 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|E8S4S3|E8S4S3_MICSL ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Micromonospora sp. (strain L5)
GN=ML5_4959 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=0.961"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|U5W2E1|U5W2E1_9ACTO ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=ATP-independent RNA
helicase OS=Actinoplanes friuliensis DSM 7358 GN=AFR_24580
PE=3 SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A014LE31|A0A014LE31_9ACTO ;
ALN/Q_length_ratio=0.984 ; DESCRIPTION=Heavy metal
transporter OS=Streptomyces sp. PRh5 GN=Z951_34435 PE=3
SV=1 ; EVALUE=0.0 ; Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|G2NY60|G2NY60_STRVO ;
ALN/Q_length_ratio=0.970 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Streptomyces violaceusniger Tu
4113 GN=Strvi_1813 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|W2F0L7|W2F0L7_9ACTO ;
ALN/Q_length_ratio=0.991 ; DESCRIPTION=Heavy metal
transporter OS=Microbispora sp. ATCC PTA-5024
GN=MPTA5024_03930 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|C6WIG4|C6WIG4_ACTMD ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=DEAD/DEAH box
helicase domain protein OS=Actinosynnema mirum (strain
ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
GN=Amir_2267 PE=3 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.002"
/note="Pfam_scan:hit_1 (39..207); Pfam:PF00270.24:DEAD;
Pfam_type:Domain;HMM_aln_Length:163; HMM_Length:169;
EVALUE:1.6e-46; BITSCORE: 157.9"
/note="Pfam_scan:hit_2 (276..353);
Pfam:PF00271.26:Helicase_C;
Pfam_type:Family;HMM_aln_Length:75; HMM_Length:78;
EVALUE:2.6e-24; BITSCORE: 84.8"
/note="Pfam_scan:hit_3 (486..559); Pfam:PF03880.10:DbpA;
Pfam_type:Domain;HMM_aln_Length:71; HMM_Length:74;
EVALUE:2e-23; BITSCORE: 81.8"
/note="GO_domain:GO:0043167"
BEGIN
1 MVETMAETTA TMTVSGFANL GLDNRLVDAL SGLGYEEPTP IQREAIPPLI EGRDVIGQAA
61 TGTGKTAAFS LPLIHRLSTL TVRTRPTALI LVPTRELAMQ VAESVERYGK PLGIRVLAMY
121 GGTGMDTQFR ALHRGVDVVV ATPGRALDHL RRGSLVLSEI AAVVLDEADE MLDMGFAEDI
181 EALIAATPTT RQTVLFSATM APRIRAIAGR HLTNAVEIVI ARAPVAAGAA PRVRQTAYLV
241 PRVHKLAALG RVLDAEAPKA ALIFCKTRSE VDQLTEALAA RGYRPEALHG GMSQDQRDRV
301 MRLFRSGQAN LLVATDVAAR GLDVDHLTHV VNYQLPLGTE AYVHRIGRVG RAGREGVALT
361 VAEPREQSAL RAIERVTGQR VEFARVPTAA DLKARRAERT KDAIRATIAE GELDQFRGIV
421 ESLGSEFDPT AIALAALKLA HRAEIGDTAD EPDIPTTVPE QSRTPFRARG QQHQQHQTRS
481 PGPRLARIFI SAGRESGIAP RDLVGAIANE SGLPGRDIRG IEITDRFSIV EVPEDAAEHV
541 IESLNGARLR GRRVSARRDR RE
//