LOCUS VTR94611.1 316 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana dna repair protein : DNA repair protein
RecO OS=Planctomyces limnophilus (strain ATCC 43296 /
DSM 3776 / IFAM 1008 / 290) GN=recO PE=3 SV=1: RecO_N:
RecO_C protein.
ACCESSION LR593886-3912
PROTEIN_ID VTR94611.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_31030"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D5SRN7|D5SRN7_PLAL2 ;
ALN/Q_length_ratio=0.399 ; DESCRIPTION=DNA repair protein
RecO OS=Planctomyces limnophilus (strain ATCC 43296 / DSM
3776 / IFAM 1008 / 290) GN=recO PE=3 SV=1 ; EVALUE=1e-38 ;
Q/S_length_ratio=1.269"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A6CD04|A6CD04_9PLAN ;
ALN/Q_length_ratio=0.396 ; DESCRIPTION=DNA repair protein
RecO OS=Planctomyces maris DSM 8797 GN=recO PE=3 SV=1 ;
EVALUE=2e-36 ; Q/S_length_ratio=1.274"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|L0DNE9|L0DNE9_SINAD ;
ALN/Q_length_ratio=0.399 ; DESCRIPTION=DNA repair protein
RecO OS=Singulisphaera acidiphila (strain ATCC BAA-1392 /
DSM 18658 / VKM B-2454 / MOB10) GN=recO PE=3 SV=1 ;
EVALUE=9e-36 ; Q/S_length_ratio=1.274"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|E8QXT4|E8QXT4_ISOPI ;
ALN/Q_length_ratio=0.408 ; DESCRIPTION=DNA repair protein
RecO OS=Isosphaera pallida (strain ATCC 43644 / DSM 9630 /
IS1B) GN=recO PE=3 SV=1 ; EVALUE=3e-35 ;
Q/S_length_ratio=1.230"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|D2QYW8|D2QYW8_PIRSD ;
ALN/Q_length_ratio=0.427 ; DESCRIPTION=DNA repair protein
RecO OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 /
ICPB 4128) GN=recO PE=3 SV=1 ; EVALUE=9e-33 ;
Q/S_length_ratio=1.259"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5RHZ9|M5RHZ9_9PLAN ;
ALN/Q_length_ratio=0.396 ; DESCRIPTION=DNA repair protein
RecO OS=Rhodopirellula maiorica SM1 GN=recO PE=3 SV=1 ;
EVALUE=2e-31 ; Q/S_length_ratio=1.192"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A3ZXS5|A3ZXS5_9PLAN ;
ALN/Q_length_ratio=0.437 ; DESCRIPTION=DNA repair protein
RecO OS=Blastopirellula marina DSM 3645 GN=recO PE=3 SV=1
; EVALUE=8e-31 ; Q/S_length_ratio=1.264"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|F0SNQ9|F0SNQ9_PLABD ;
ALN/Q_length_ratio=0.386 ; DESCRIPTION=DNA repair protein
RecO OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM
5305 / JCM 21570 / NBRC 103401 / IFAM 1448) GN=recO PE=3
SV=1 ; EVALUE=6e-29 ; Q/S_length_ratio=1.269"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|M5SKE0|M5SKE0_9PLAN ;
ALN/Q_length_ratio=0.386 ; DESCRIPTION=DNA repair protein
recO (Fragment) OS=Rhodopirellula europaea SH398
GN=RESH_02806 PE=4 SV=1 ; EVALUE=1e-25 ;
Q/S_length_ratio=2.341"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|K5CHM4|K5CHM4_RHOBT ;
ALN/Q_length_ratio=0.437 ; DESCRIPTION=DNA repair protein
RecO OS=Rhodopirellula baltica SH28 GN=recO PE=3 SV=1 ;
EVALUE=3e-25 ; Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_11 ; ACCESSION=Q7USC2 ;
ALN/Q_length_ratio=0.418 ; DESCRIPTION=DNA repair protein
RecO OS=Rhodopirellula baltica (strain SH1) GN=recO PE=3
SV=2 ; EVALUE=8e-25 ; Q/S_length_ratio=1.170"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|L7CPZ7|L7CPZ7_RHOBT ;
ALN/Q_length_ratio=0.437 ; DESCRIPTION=DNA repair protein
RecO OS=Rhodopirellula baltica SWK14 GN=recO PE=3 SV=1 ;
EVALUE=9e-25 ; Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|F2ATL5|F2ATL5_RHOBT ;
ALN/Q_length_ratio=0.437 ; DESCRIPTION=DNA repair protein
RecO OS=Rhodopirellula baltica WH47 GN=recO PE=3 SV=1 ;
EVALUE=9e-25 ; Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|M2AMB9|M2AMB9_9PLAN ;
ALN/Q_length_ratio=0.386 ; DESCRIPTION=DNA repair protein
RecO OS=Rhodopirellula europaea 6C GN=recO PE=3 SV=1 ;
EVALUE=2e-24 ; Q/S_length_ratio=1.145"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|M5TYN7|M5TYN7_9PLAN ;
ALN/Q_length_ratio=0.364 ; DESCRIPTION=DNA repair protein
RecO OS=Rhodopirellula sallentina SM41 GN=recO PE=3 SV=1 ;
EVALUE=1e-22 ; Q/S_length_ratio=1.057"
/note="Pfam_scan:hit_1 (1..80); Pfam:PF11967.3:RecO_N;
Pfam_type:Domain;HMM_aln_Length:74; HMM_Length:80;
EVALUE:5.8e-17; BITSCORE: 61.3"
/note="Pfam_scan:hit_2 (84..136); Pfam:PF02565.10:RecO_C;
Pfam_type:Family;HMM_aln_Length:47; HMM_Length:118;
EVALUE:1e-07; BITSCORE: 31.8"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0006950"
BEGIN
1 MAADKALAIV VRGTDWSETS RIATLFTREF GKVRALAKGG RRLKSNFDVA FDLLTVCEVV
61 FIRKASGLDL LTEARMNEQF PTLRQNLSAL YAGYYVAELL ADGTQDYDPH PPLFDAAIQT
121 LRSLGKGRKP NPLTPFPRKE GGTEPKTGID TPQAPVLSPS PFRGGVGEGL QPQPTPPSPL
181 PEGKGDGGVG SPTSGNGGLD LAARVSAFEL VWLQELGYSP RLEACATCGR ERLNPTARAF
241 FSPSAGGVLC PECGPAVADR RMVSGESLET IRALSAGGAG PELPPGVRTE VRQVLGYAVS
301 CVLGRRPRLL SFVDAR
//