LOCUS VTR94606.1 129 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-binding protein : Putative uncharacterized
protein (Fragment) OS=Gemmata sp. Wa1-1 PE=4 SV=1: RRM_1
protein.
ACCESSION LR593886-3907
PROTEIN_ID VTR94606.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_31080"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|Q5EUH9|Q5EUH9_9PLAN ;
ALN/Q_length_ratio=0.643 ; DESCRIPTION=Putative
uncharacterized protein (Fragment) OS=Gemmata sp. Wa1-1
PE=4 SV=1 ; EVALUE=2e-53 ; Q/S_length_ratio=1.057"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|W6MDL3|W6MDL3_9GAMM ;
ALN/Q_length_ratio=0.667 ; DESCRIPTION=Glycine-rich
RNA-binding, abscisic acid-inducible protein OS=Candidatus
Competibacter denitrificans Run_A_D11 GN=RAB PE=4 SV=1 ;
EVALUE=6e-37 ; Q/S_length_ratio=1.040"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H5WUL4|H5WUL4_9BURK ;
ALN/Q_length_ratio=0.643 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Burkholderiales
bacterium JOSHI_001 GN=BurJ1DRAFT_0558 PE=4 SV=1 ;
EVALUE=7e-33 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|I0HYE0|I0HYE0_RUBGI ;
ALN/Q_length_ratio=0.643 ; DESCRIPTION=RNP-1 like
RNA-binding protein, Glycine-rich OS=Rubrivivax
gelatinosus (strain NBRC 100245 / IL144) GN=RGE_46940 PE=4
SV=1 ; EVALUE=1e-32 ; Q/S_length_ratio=0.801"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A0A0DP58|A0A0A0DP58_9BURK ;
ALN/Q_length_ratio=0.682 ; DESCRIPTION=RNA-binding protein
OS=Aquabacterium sp. NJ1 GN=JY96_11020 PE=4 SV=1 ;
EVALUE=3e-31 ; Q/S_length_ratio=0.806"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|A2SMG9|A2SMG9_METPP ;
ALN/Q_length_ratio=0.643 ; DESCRIPTION=RNA-binding region
RNP-1 OS=Methylibium petroleiphilum (strain PM1)
GN=Mpe_A3805 PE=4 SV=1 ; EVALUE=3e-31 ;
Q/S_length_ratio=0.796"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|C5CY78|C5CY78_VARPS ;
ALN/Q_length_ratio=0.651 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Variovorax paradoxus (strain S110)
GN=Vapar_0319 PE=4 SV=1 ; EVALUE=4e-31 ;
Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|T1X588|T1X588_VARPD ;
ALN/Q_length_ratio=0.651 ; DESCRIPTION=RNA recognition
motif-containing protein OS=Variovorax paradoxus B4
GN=VAPA_1c03840 PE=4 SV=1 ; EVALUE=4e-31 ;
Q/S_length_ratio=0.942"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L0DII4|L0DII4_SINAD ;
ALN/Q_length_ratio=0.643 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_5050 PE=4 SV=1 ; EVALUE=1e-30 ;
Q/S_length_ratio=0.970"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|J3CJC3|J3CJC3_9BURK ;
ALN/Q_length_ratio=0.651 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Variovorax sp.
CF313 GN=PMI12_03807 PE=4 SV=1 ; EVALUE=2e-30 ;
Q/S_length_ratio=0.963"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A059KKA3|A0A059KKA3_9BURK ;
ALN/Q_length_ratio=0.682 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Sphaerotilus natans subsp. natans
DSM 6575 GN=X805_25390 PE=4 SV=1 ; EVALUE=2e-30 ;
Q/S_length_ratio=0.838"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|B1Y6Y3|B1Y6Y3_LEPCP ;
ALN/Q_length_ratio=0.682 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Leptothrix cholodnii (strain ATCC
51168 / LMG 8142 / SP-6) GN=Lcho_0186 PE=4 SV=1 ;
EVALUE=2e-30 ; Q/S_length_ratio=0.822"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|H5WMN2|H5WMN2_9BURK ;
ALN/Q_length_ratio=0.643 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Burkholderiales
bacterium JOSHI_001 GN=BurJ1DRAFT_5009 PE=4 SV=1 ;
EVALUE=2e-30 ; Q/S_length_ratio=0.772"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|E6V2D5|E6V2D5_VARPE ;
ALN/Q_length_ratio=0.651 ; DESCRIPTION=RNP-1 like
RNA-binding protein OS=Variovorax paradoxus (strain EPS)
GN=Varpa_0344 PE=4 SV=1 ; EVALUE=2e-30 ;
Q/S_length_ratio=0.935"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|L0D826|L0D826_SINAD ;
ALN/Q_length_ratio=0.651 ; DESCRIPTION=RRM
domain-containing RNA-binding protein OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_0549 PE=4 SV=1 ; EVALUE=2e-30 ;
Q/S_length_ratio=1.084"
/note="Pfam_scan:hit_1 (5..75); Pfam:PF00076.17:RRM_1;
Pfam_type:Domain;HMM_aln_Length:68; HMM_Length:70;
EVALUE:1.6e-22; BITSCORE: 78.8"
/note="GO_domain:GO:0003674"
BEGIN
1 MGKKLYVGNL SWGVTDAQLQ DMFAPYGSVV SAQVIMDRDT GRSKGFGFVE MGTDQEAQAA
61 ITGMHGQVIE GRPLTVNEAR PKEGGGGGGG GRRGGGGGGY GGGGGGYGGG GGGYGGGGGG
121 YGGGGGRRY
//