LOCUS VTR94552.1 592 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana single-stranded-dna-specific exonuclease
: Exonuclease RecJ OS=Planctomyces brasiliensis (strain
ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM
1448) GN=Plabr_4350 PE=4 SV=1: DHH: DHHA1 protein.
ACCESSION LR593886-3853
PROTEIN_ID VTR94552.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_31620"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|F0SJT5|F0SJT5_PLABD ;
ALN/Q_length_ratio=0.981 ; DESCRIPTION=Exonuclease RecJ
OS=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305
/ JCM 21570 / NBRC 103401 / IFAM 1448) GN=Plabr_4350 PE=4
SV=1 ; EVALUE=1e-169 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A3ZZC6|A3ZZC6_9PLAN ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Single-strand
DNA-specific exonuclease OS=Blastopirellula marina DSM
3645 GN=DSM3645_18751 PE=4 SV=1 ; EVALUE=1e-163 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D2R2J0|D2R2J0_PIRSD ;
ALN/Q_length_ratio=0.973 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB
4128) GN=Psta_2157 PE=4 SV=1 ; EVALUE=1e-163 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|A6BZD1|A6BZD1_9PLAN ;
ALN/Q_length_ratio=0.978 ; DESCRIPTION=Single-strand
DNA-specific exonuclease OS=Planctomyces maris DSM 8797
GN=PM8797T_28899 PE=4 SV=1 ; EVALUE=1e-161 ;
Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|L0DLY9|L0DLY9_SINAD ;
ALN/Q_length_ratio=0.966 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM
18658 / VKM B-2454 / MOB10) GN=Sinac_6173 PE=4 SV=1 ;
EVALUE=1e-159 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5RK29|M5RK29_9PLAN ;
ALN/Q_length_ratio=0.976 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Rhodopirellula maiorica SM1 GN=RMSM_03404 PE=4 SV=1 ;
EVALUE=1e-158 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K5D662|K5D662_RHOBT ;
ALN/Q_length_ratio=0.975 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Rhodopirellula baltica SH28 GN=RBSH_02543 PE=4 SV=1 ;
EVALUE=1e-155 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|Q7UMM9|Q7UMM9_RHOBA ;
ALN/Q_length_ratio=0.975 ; DESCRIPTION=Single-strand
DNA-specific exonuclease OS=Rhodopirellula baltica (strain
SH1) GN=recJ PE=4 SV=1 ; EVALUE=1e-155 ;
Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|F2ALI6|F2ALI6_RHOBT ;
ALN/Q_length_ratio=0.975 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Rhodopirellula baltica WH47 GN=RBWH47_03059 PE=4 SV=1 ;
EVALUE=1e-155 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|L7CGT6|L7CGT6_RHOBT ;
ALN/Q_length_ratio=0.975 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Rhodopirellula baltica SWK14 GN=RBSWK_03985 PE=4 SV=1 ;
EVALUE=1e-155 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|M2B0V9|M2B0V9_9PLAN ;
ALN/Q_length_ratio=0.975 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Rhodopirellula europaea 6C GN=RE6C_03473 PE=4 SV=1 ;
EVALUE=1e-154 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M5RWR4|M5RWR4_9PLAN ;
ALN/Q_length_ratio=0.975 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Rhodopirellula europaea SH398 GN=RESH_05591 PE=4 SV=1 ;
EVALUE=1e-154 ; Q/S_length_ratio=0.988"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5TBS3|M5TBS3_9PLAN ;
ALN/Q_length_ratio=0.975 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Rhodopirellula sp. SWK7 GN=RRSWK_04480 PE=4 SV=1 ;
EVALUE=1e-153 ; Q/S_length_ratio=1.007"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|D5SR53|D5SR53_PLAL2 ;
ALN/Q_length_ratio=0.980 ;
DESCRIPTION=Single-stranded-DNA-specific exonuclease RecJ
OS=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776
/ IFAM 1008 / 290) GN=Plim_0674 PE=4 SV=1 ; EVALUE=1e-152
; Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|I3IKP8|I3IKP8_9PLAN ;
ALN/Q_length_ratio=0.965 ; DESCRIPTION=Single-strand
DNA-specific exonuclease OS=planctomycete KSU-1
GN=KSU1_C0697 PE=4 SV=1 ; EVALUE=1e-140 ;
Q/S_length_ratio=1.026"
/note="Pfam_scan:hit_1 (76..246); Pfam:PF01368.15:DHH;
Pfam_type:Family;HMM_aln_Length:134; HMM_Length:145;
EVALUE:8e-18; BITSCORE: 64.4"
/note="Pfam_scan:hit_2 (390..456); Pfam:PF02272.14:DHHA1;
Pfam_type:Family;HMM_aln_Length:66; HMM_Length:68;
EVALUE:7.3e-06; BITSCORE: 25.6"
/note="GO_domain:GO:0004518"
/note="GO_domain:GO:0006259"
/note="GO_domain:GO:0006950"
/note="Enzyme_Code:EC:3.1"
BEGIN
1 MARAEKQWHL LPSDSTATNR LAGAARVSSV VAQLLINRGV RDAAAARRFL DTPLGGLLPP
61 MALPGVRDAA DRIARAIADK RRICIYGDYD VDGVTGTSVL LRVLNKLGAD VQFHVPLRLS
121 EGYGLNGERL RELQRAGVSM VVSVDCGIAS LAEAQVAREI GLELIVTDHH EMKMGLDGPI
181 LPLASVLVHP RLPAPEPYPF GDLSGAGVAF KLAWAVAQRA TGSERVPADL REILLDAVGL
241 AALGLVADVV PLRDENRIFV RHGLERIRTN PSVGLKALLD ASGVKPDQVL TSEDVGFKLA
301 PRLNAAGRLG CASFAVELLT TTSITKAVQL AQQLEALNSD RQSHERKYTQ AAKEMVEEQF
361 ANDPAIVVGS EDWHPGVIGI VASRLVDYFG KPALVIAMQP NEPIATGSGR SVTGFALHTA
421 LVACDDILEG HGGHAAAAGL KVRQERIPAL RERFNAYVTN HYPGGAPAQQ LTLDAEVPLS
481 AITFGLLKDL DKLEPYGAAN PKPKFLAAGL KVEGARLIGT GEVQRHMDFR VRQGETTIRC
541 VAWGMADRLE ELMSANGDCC LAFTPKINEW KGYKKIELQV IDLKPGKTVP LV
//