LOCUS VTR94547.1 348 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana family transcriptional regulator :
Transcriptional regulator containing an amidase domain
and an AraC-type DNA-binding HTH domain OS=Singulisphaera
acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454
/ MOB10) GN=Sinac_4113 PE=4 SV=1: DUF4066: HTH_18 protein.
ACCESSION LR593886-3848
PROTEIN_ID VTR94547.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_31670"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|L0DGC1|L0DGC1_SINAD ;
ALN/Q_length_ratio=0.934 ; DESCRIPTION=Transcriptional
regulator containing an amidase domain and an AraC-type
DNA-binding HTH domain OS=Singulisphaera acidiphila
(strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10)
GN=Sinac_4113 PE=4 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A4A179|A4A179_9PLAN ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=Transcriptional
regulator, AraC family protein OS=Blastopirellula marina
DSM 3645 GN=DSM3645_19952 PE=4 SV=1 ; EVALUE=1e-121 ;
Q/S_length_ratio=1.071"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|B9B3Z1|B9B3Z1_9BURK ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=DarR
OS=Burkholderia multivorans CGD1 GN=BURMUCGD1_0552 PE=4
SV=1 ; EVALUE=1e-115 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A063BF95|A0A063BF95_9BURK ;
ALN/Q_length_ratio=0.908 ; DESCRIPTION=DJ-1 domain,
InhA-type OS=Burkholderia sp. lig30 GN=LIG30_4471 PE=4
SV=1 ; EVALUE=1e-115 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|J4S088|J4S088_9BURK ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=DNA-binding
helix-turn-helix protein OS=Burkholderia multivorans ATCC
BAA-247 GN=BURMUCF1_2688 PE=4 SV=1 ; EVALUE=1e-115 ;
Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|A0A024HH42|A0A024HH42_PSESB ;
ALN/Q_length_ratio=0.902 ; DESCRIPTION=Transcriptional
regulator containing an amidase domain and an AraC-type
DNA-binding HTH domain OS=Pseudomonas knackmussii B13
GN=PKB_2421 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.094"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|B9CCD5|B9CCD5_9BURK ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=DarR
OS=Burkholderia multivorans CGD2M GN=BURMUCGD2M_0887 PE=4
SV=1 ; EVALUE=1e-114 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|B1JY22|B1JY22_BURCC ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Transcriptional
regulator, AraC family OS=Burkholderia cenocepacia (strain
MC0-3) GN=Bcenmc03_2686 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|J5BNL6|J5BNL6_9BURK ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=DNA-binding
helix-turn-helix protein OS=Burkholderia multivorans CF2
GN=BURMUCF2_2704 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A095E1B4|A0A095E1B4_9BURK ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Helix-turn-helix
domain protein OS=Burkholderia multivorans GN=DM81_2911
PE=4 SV=1 ; EVALUE=1e-114 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A0KA80|A0KA80_BURCH ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Transcriptional
regulator, AraC family with amidase-like domain
OS=Burkholderia cenocepacia (strain HI2424)
GN=Bcen2424_2657 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|Q1BTV8|Q1BTV8_BURCA ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=Transcriptional
regulator, AraC family with amidase-like domain
OS=Burkholderia cenocepacia (strain AU 1054) GN=Bcen_2046
PE=4 SV=1 ; EVALUE=1e-114 ; Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A9AFS0|A9AFS0_BURM1 ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=AraC subfamily
transcriptional regulator OS=Burkholderia multivorans
(strain ATCC 17616 / 249) GN=Bmul_0640 PE=4 SV=1 ;
EVALUE=1e-114 ; Q/S_length_ratio=1.081"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A0A5KU28|A0A0A5KU28_BURCE ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=AraC family
transcriptional regulator OS=Burkholderia cepacia
GN=DK10_25970 PE=4 SV=1 ; EVALUE=1e-114 ;
Q/S_length_ratio=1.074"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B9BTM2|B9BTM2_9BURK ;
ALN/Q_length_ratio=0.911 ; DESCRIPTION=DarR
OS=Burkholderia multivorans CGD2 GN=BURMUCGD2_0796 PE=4
SV=1 ; EVALUE=1e-114 ; Q/S_length_ratio=1.081"
/note="Pfam_scan:hit_1 (20..186); Pfam:PF13278.1:DUF4066;
Pfam_type:Domain;HMM_aln_Length:165; HMM_Length:166;
EVALUE:7.8e-42; BITSCORE: 142.3"
/note="Pfam_scan:hit_2 (248..327); Pfam:PF12833.2:HTH_18;
Pfam_type:Domain;HMM_aln_Length:80; HMM_Length:81;
EVALUE:1.7e-19; BITSCORE: 69.7"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0001071"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MGNRDRLAHH FRPPRKLVIL AFPQAKLLDV TGPCEVFADA NRAVGRSAYT IELVSNAAGP
61 IETSSGVQLM AHRGFTGMRG PIDTLLVSGG PGIDRAMREA ALLRWLARCA TRTRRVGSIC
121 TGAFLLAAAG LLDGRRATTH WAFCDRLVQK FPRVRVEPDP IFVRDGNVYT SAGVTAGMDL
181 ALAFVEEDLG RDVALSVARN LVLFVRRQGG QSQFSTSLEL QAADREPLRD LQAWAVEHLA
241 DDLSVEALAE RAHMSTRNFS RVFRRETGYT PARFVERLRV EGARRRLEES TAGLEQIARE
301 CGFGCADSMR RSFLRLLRVA PSDYRARFRG AGEHATITSS RPKIETKD
//