LOCUS VTR94542.1 923 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana pyruvate dehydrogenase : Pyruvate dehydrogenase
E1 component OS=Rhodopirellula europaea SH398 GN=RESH_06116
PE=4 SV=1: Transketolase_N: Transketolase_N protein.
ACCESSION LR593886-3843
PROTEIN_ID VTR94542.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_31720"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|K5DM54|K5DM54_RHOBT ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Rhodopirellula baltica SH28
GN=RBSH_00710 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|M2AVK4|M2AVK4_9PLAN ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Rhodopirellula europaea 6C
GN=RE6C_02567 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|B6C196|B6C196_9GAMM ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Nitrosococcus oceani AFC27
GN=NOC27_431 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F2AUN7|F2AUN7_RHOBT ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Rhodopirellula baltica WH47
GN=RBWH47_02975 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|S6BAV1|S6BAV1_9GAMM ;
ALN/Q_length_ratio=0.952 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=endosymbiont of unidentified
scaly snail isolate Monju GN=aceE PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.044"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|H1XYS3|H1XYS3_9BACT ;
ALN/Q_length_ratio=0.949 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Caldithrix abyssi DSM 13497
GN=Calab_1317 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.037"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|G4SWZ3|G4SWZ3_META2 ;
ALN/Q_length_ratio=0.953 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Methylomicrobium
alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133
/ 20Z) GN=pdhA PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.035"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A086XLT3|A0A086XLT3_9GAMM ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Nitrosococcus oceani
GN=HW44_06355 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q3JBP1|Q3JBP1_NITOC ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Nitrosococcus oceani (strain
ATCC 19707 / NCIMB 11848) GN=Noc_1254 PE=4 SV=1 ;
EVALUE=0.0 ; Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|A4A157|A4A157_9PLAN ;
ALN/Q_length_ratio=0.972 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Blastopirellula marina DSM
3645 GN=DSM3645_06639 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.020"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|Q7UU96|Q7UU96_RHOBA ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Rhodopirellula baltica
(strain SH1) GN=RB3424 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.014"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|D5BYH5|D5BYH5_NITHN ;
ALN/Q_length_ratio=0.964 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Nitrosococcus halophilus
(strain Nc4) GN=Nhal_2900 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A086XCU3|A0A086XCU3_9GAMM ;
ALN/Q_length_ratio=0.962 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Nitrosococcus oceani C-27
GN=IB75_06545 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.036"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|L7CGL4|L7CGL4_RHOBT ;
ALN/Q_length_ratio=0.956 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Rhodopirellula baltica SWK14
GN=RBSWK_02664 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.015"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|M5SAM8|M5SAM8_9PLAN ;
ALN/Q_length_ratio=0.957 ; DESCRIPTION=Pyruvate
dehydrogenase E1 component OS=Rhodopirellula europaea
SH398 GN=RESH_06116 PE=4 SV=1 ; EVALUE=0.0 ;
Q/S_length_ratio=1.014"
/note="Pfam_scan:hit_1 (87..322);
Pfam:PF00456.16:Transketolase_N;
Pfam_type:Domain;HMM_aln_Length:219; HMM_Length:333;
EVALUE:2e-13; BITSCORE: 49.8"
/note="Pfam_scan:hit_2 (390..470);
Pfam:PF00456.16:Transketolase_N;
Pfam_type:Domain;HMM_aln_Length:61; HMM_Length:333;
EVALUE:0.00015; BITSCORE: 20.7"
/note="GO_domain:GO:0016491"
BEGIN
1 MLVTPDVLAL NSARLPEDVD PQETTEWLEA MEAVLKHGGP ERAKFLLETL IAVTDRAGAK
61 MPGGVTTPYV NTIPVEDQPT FPGDRALERK IKSIVRWNAM AMVQKANKNT NVGGHIGTFA
121 SAATLYEVGF NHFFHGRSAD HPGDVVFFQG HASPGMYSRA FVEGRLDETK LNNFRQELKP
181 GGGISSYPHP WLMPDFWQYP TVSMGLGPIM SIYHARYNRY LRDRELAKTD LARVWAFLGD
241 GECDEPESLG AISLAGREKL DNLTWVINCN LQRLDGPVRG NSKIIQELEG IFRGAGWNVI
301 KVIWGTDWDE LLKNDHTGAL ARRMMEVVDG EYCDYVGRDM RTAEEKVTHA KKSDVITDEE
361 DADRRGAYIR DTFFNTPELK SLVEHLSNKD IAGLKRGGHD PLKVYAAYKA ATEHKGQPTV
421 ILVKTVKGYG MAGDGGQGKF TNHQQKKVAI KEFRDRFELP ITDDQLEHIP FYRPADDSPE
481 MKYMKARRAA LGGPQPFRNN EFIPCQPPER KGFERQYEAT IQGKPISTTF AWVNLMTAIC
541 RDPHIGKLLV PIVPDEGQTF GMPPMYKTFG MYSSVGQTYT PVDKGSYTEY RESKTGQILQ
601 EGINEAGSMA SWIAAGTAYS THGVNTIPFY IYYSMFGFQR IGDLAWAAAD ARTRGFLMGG
661 TAGRTTINGE GLQHEDGHSH LMAMTIPTCR TYDPAFAYEL AVIVEEGINA MYVRNEECFY
721 YLTVYNEAYE MPAMPGEHVR EGIIRGLYSV KSVKPASAKL EVQLVGSGVI LNEALRAQQI
781 LAEKYNIAST VYSATSYQML RKDAIECERH NRLHPDATKK VPFVAQVLGG TNGPIIATSD
841 YMRALPETVA PYLNGRMLAL GTDGFGRSET RKALRRFFEV DAENVTVAAL YSLFQQGQLD
901 PGTVKKAIAD LGIDPDAAHP WTI
//