LOCUS VTR94525.1 367 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana gtp-binding protein : Ribosome-binding
ATPase YchF OS=Rhodospirillum rubrum F11 GN=ychF PE=3
SV=1: MMR_HSR1: YchF-GTPase_C protein.
ACCESSION LR593886-3826
PROTEIN_ID VTR94525.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_31890"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q2RMV3|Q2RMV3_RHORT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Rhodospirillum rubrum (strain ATCC 11170 /
NCIB 8255) GN=ychF PE=3 SV=1 ; EVALUE=1e-180 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|G2TGA9|G2TGA9_RHORU ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Rhodospirillum rubrum F11 GN=ychF PE=3 SV=1
; EVALUE=1e-180 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|G7Z1S1|G7Z1S1_AZOL4 ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Azospirillum lipoferum (strain 4B) GN=engD
PE=3 SV=1 ; EVALUE=1e-179 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|M3A7P0|M3A7P0_9PROT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Magnetospirillum sp. SO-1 GN=ychF PE=3 SV=1
; EVALUE=1e-178 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A0A074JV26|A0A074JV26_9PROT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Thalassospira permensis NBRC 106175 GN=ychF
PE=3 SV=1 ; EVALUE=1e-178 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|B6IWW0|B6IWW0_RHOCS ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Rhodospirillum centenum (strain ATCC 51521
/ SW) GN=ychF PE=3 SV=1 ; EVALUE=1e-178 ;
Q/S_length_ratio=1.005"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|K2KUJ5|K2KUJ5_9PROT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Thalassospira profundimaris WP0211 GN=ychF
PE=3 SV=1 ; EVALUE=1e-177 ; Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D3NW57|D3NW57_AZOS1 ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Azospirillum sp. (strain B510) GN=ychF PE=3
SV=1 ; EVALUE=1e-177 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A060DUB1|A0A060DUB1_AZOBR ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Azospirillum brasilense GN=ychF PE=3 SV=1 ;
EVALUE=1e-177 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|Q2VZ25|Q2VZ25_MAGSA ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264) GN=ychF PE=3 SV=1 ; EVALUE=1e-177 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|G8AZF4|G8AZF4_AZOBR ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Azospirillum brasilense Sp245 GN=engD PE=3
SV=1 ; EVALUE=1e-177 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|K2MKL6|K2MKL6_9PROT ;
ALN/Q_length_ratio=0.995 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Thalassospira xiamenensis M-5 = DSM 17429
GN=ychF PE=3 SV=1 ; EVALUE=1e-177 ;
Q/S_length_ratio=1.000"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|T0K9P0|T0K9P0_9SPHN ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Sphingobium ummariense RL-3 GN=ychF PE=3
SV=1 ; EVALUE=1e-176 ; Q/S_length_ratio=1.003"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A075MIN3|A0A075MIN3_9RICK ;
ALN/Q_length_ratio=0.989 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=endosymbiont of Acanthamoeba sp. UWC8
GN=ychF PE=3 SV=1 ; EVALUE=1e-176 ;
Q/S_length_ratio=1.008"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|W1S481|W1S481_9SPHN ;
ALN/Q_length_ratio=0.992 ; DESCRIPTION=Ribosome-binding
ATPase YchF OS=Sphingobium sp. C100 GN=ychF PE=3 SV=1 ;
EVALUE=1e-175 ; Q/S_length_ratio=1.003"
/note="Pfam_scan:hit_1 (4..137); Pfam:PF01926.18:MMR_HSR1;
Pfam_type:Family;HMM_aln_Length:89; HMM_Length:116;
EVALUE:2.6e-20; BITSCORE: 72.5"
/note="Pfam_scan:hit_2 (283..366);
Pfam:PF06071.8:YchF-GTPase_C;
Pfam_type:Domain;HMM_aln_Length:82; HMM_Length:84;
EVALUE:2.4e-38; BITSCORE: 129.7"
/note="GO_domain:GO:0043167"
BEGIN
1 MGFECGIVGL PNVGKSTLFN ALLSTMQAEA ANYPFCTIEP NVGRVAVPDE RLPLLAKIAS
61 SAKQIPTQLE FVDIAGLVRG ASKGEGKGNE FLSHIRTVDA ILYVLRCFED SDIVHVEGSV
121 DPLRDAEVIE TELMLADLDS LEKRLPAAQK KAKGGDKTAA EQIAMMERAI KVLQDGKPAT
181 AVNPRDKAER KLLDGLQLLT SKPVMFVCNV EEQFAATGNS LSAKVEAMAA GRNASCVVVS
241 AKIEAEISIL PSEEEKKEFL SSLGLAETGL AKVVKAGYQL LDLITYFTVG PKETRAWTIQ
301 SGTLAPQAAG VIHSDFEAGF IRAETVSYGD YTQYDGEAGA KKAGRFRLEG KEYVVQDGDV
361 LHFRFGP
//