LOCUS VTR94519.1 512 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana formate hydrogenlyase transcriptional
activator : Formate hydrogenlyase transcriptional activator
OS=Candidatus Nitrospira defluvii GN=fhlA PE=4 SV=1: Sigma54_activat
: HTH_8 protein.
ACCESSION LR593886-3820
PROTEIN_ID VTR94519.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_31950"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8P9A8|D8P9A8_9BACT ;
ALN/Q_length_ratio=0.764 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Candidatus
Nitrospira defluvii GN=fhlA PE=4 SV=1 ; EVALUE=1e-153 ;
Q/S_length_ratio=0.739"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|Q026M7|Q026M7_SOLUE ;
ALN/Q_length_ratio=0.959 ; DESCRIPTION=Transcriptional
regulator, NifA subfamily, Fis Family OS=Solibacter
usitatus (strain Ellin6076) GN=Acid_2052 PE=4 SV=1 ;
EVALUE=1e-151 ; Q/S_length_ratio=0.725"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|D8PIU6|D8PIU6_9BACT ;
ALN/Q_length_ratio=0.762 ; DESCRIPTION=Sigma-54 dependent
transcriptional regulator (Modular protein) OS=Candidatus
Nitrospira defluvii GN=NIDE3498 PE=4 SV=1 ; EVALUE=1e-148
; Q/S_length_ratio=0.591"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q01NG3|Q01NG3_SOLUE ;
ALN/Q_length_ratio=0.955 ; DESCRIPTION=Transcriptional
regulator, NifA subfamily, Fis Family OS=Solibacter
usitatus (strain Ellin6076) GN=Acid_7913 PE=4 SV=1 ;
EVALUE=1e-145 ; Q/S_length_ratio=0.766"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|G8NWV4|G8NWV4_GRAMM ;
ALN/Q_length_ratio=0.768 ; DESCRIPTION=Transcriptional
regulator, NifA subfamily, Fis Family OS=Granulicella
mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)
GN=AciX8_1137 PE=4 SV=1 ; EVALUE=1e-144 ;
Q/S_length_ratio=0.713"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|K4WLJ0|K4WLJ0_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator FhlA
OS=Escherichia coli O26:H11 str. CVM10021
GN=ECO10021_18722 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A070D1S0|A0A070D1S0_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Uncharacterized
protein OS=Escherichia coli O69:H11 str. 07-3763
GN=BU59_17500 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|M9K4G0|M9K4G0_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Escherichia
coli Envira 10/1 GN=ECENVIRA101_3329 PE=4 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|V4CYS9|V4CYS9_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Escherichia
coli HVH 36 (4-5675286) GN=G711_03195 PE=4 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|M9KBE2|M9KBE2_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Escherichia
coli Envira 8/11 GN=ECENVIRA811_3274 PE=4 SV=1 ;
EVALUE=1e-141 ; Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|H5F3B3|H5F3B3_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=FhlA
transcriptional activator OS=Escherichia coli DEC10D
GN=ECDEC10D_3745 PE=4 SV=1 ; EVALUE=1e-141 ;
Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|I6FLR1|I6FLR1_SHIDY ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Shigella
dysenteriae 225-75 GN=SD22575_3710 PE=4 SV=1 ;
EVALUE=1e-140 ; Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|T6A2T2|T6A2T2_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Escherichia
coli HVH 41 (4-2677849) GN=G716_02859 PE=4 SV=1 ;
EVALUE=1e-140 ; Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A0A079BRZ8|A0A079BRZ8_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Escherichia
coli 2-052-05_S3_C3 GN=AC42_2917 PE=4 SV=1 ; EVALUE=1e-140
; Q/S_length_ratio=0.898"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A0A074GNY5|A0A074GNY5_ECOLX ;
ALN/Q_length_ratio=0.977 ; DESCRIPTION=Formate
hydrogenlyase transcriptional activator OS=Escherichia
coli 2-052-05_S3_C2 GN=AC14_2981 PE=4 SV=1 ; EVALUE=1e-140
; Q/S_length_ratio=0.898"
/note="Pfam_scan:hit_1 (192..359);
Pfam:PF00158.21:Sigma54_activat;
Pfam_type:Domain;HMM_aln_Length:166; HMM_Length:168;
EVALUE:2.1e-71; BITSCORE: 238.7"
/note="Pfam_scan:hit_2 (457..501); Pfam:PF02954.14:HTH_8;
Pfam_type:Domain;HMM_aln_Length:38; HMM_Length:42;
EVALUE:5.8e-06; BITSCORE: 25.7"
/note="GO_domain:GO:0003677"
/note="GO_domain:GO:0043167"
/note="GO_domain:GO:0008134"
/note="GO_domain:GO:0034641"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0005622"
BEGIN
1 MLLAVAQAVA AHTDLGALLR DLAAALGAHL PRGYLSFALL ELHSHAGKLQ FLEPLGGAAP
61 PKPADTPTEL PAAESPTAHV WDTQEPFWLD INANGRFRML RAAFAKQGVQ CACFVPLTTP
121 RRKLGAMGFT SYLPVTPAPG DIDFAVQVGR LVALAVEGAL TRQELERANA RLAAEKLYLE
181 EEIRTDRRMG EVVGASPALH VVLQQVGVVA PTDSAVLITG ETGTGKELIA RAVHRLSERR
241 DRTFVKLNCA AIPTGLLESE LFGHEKGAFT GAVERRLGRF ELADGGTLFL DEVGDIPPEL
301 QPKLLRVLQE QEFERLGSAK TIKVNVRLVA ATHRNLAKLV AEGKFRSDLY YRLHVFPVHL
361 PALRERHEDI PELVRHFVAL FAQRFGKKIG TIPPETMAAL ERYSWPGNVR ELEHLVERAV
421 ILSIPGGELR VPLNDLISPE STDESTSEVP VLATRATLLE SERELIRRAL DECEWIIGGP
481 SGAAARLGLK RTTLLSRMKK MGFTRPDRGS VE
//