LOCUS VTR94423.1 779 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana chemotaxis partial : Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1: 4HB_MCP_1:
HAMP: PAS_9: MCPsignal protein.
ACCESSION LR593886-3724
PROTEIN_ID VTR94423.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_32910"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|D8PFN9|D8PFN9_9BACT ;
ALN/Q_length_ratio=0.642 ; DESCRIPTION=Globin-coupled
methyl-accepting chemotaxis protein (Modular protein)
OS=Candidatus Nitrospira defluvii GN=cheM PE=3 SV=1 ;
EVALUE=1e-151 ; Q/S_length_ratio=1.009"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A038GYS9|A0A038GYS9_9BURK ;
ALN/Q_length_ratio=0.592 ; DESCRIPTION=Chemotaxis protein
OS=Burkholderia sp. MP-1 GN=BG58_15470 PE=4 SV=1 ;
EVALUE=1e-149 ; Q/S_length_ratio=1.303"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|H0SRT6|H0SRT6_9BRAD ;
ALN/Q_length_ratio=0.582 ; DESCRIPTION=Putative
methyl-accepting chemotaxis protein (MCP) with multiple
PAS domains OS=Bradyrhizobium sp. ORS 375
GN=BRAO375_800034 PE=4 SV=1 ; EVALUE=1e-148 ;
Q/S_length_ratio=1.498"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|Q07SD7|Q07SD7_RHOP5 ;
ALN/Q_length_ratio=0.637 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Rhodopseudomonas palustris (strain BisA53) GN=RPE_1195
PE=4 SV=1 ; EVALUE=1e-145 ; Q/S_length_ratio=0.856"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|F4AI75|F4AI75_GLAS4 ;
ALN/Q_length_ratio=0.571 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Glaciecola sp. (strain 4H-3-7+YE-5) GN=Glaag_2576 PE=4
SV=1 ; EVALUE=1e-144 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|K6X5F6|K6X5F6_9ALTE ;
ALN/Q_length_ratio=0.571 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Glaciecola agarilytica NO2 GN=mcp
PE=4 SV=1 ; EVALUE=1e-144 ; Q/S_length_ratio=0.923"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|D7HGU4|D7HGU4_VIBCL ;
ALN/Q_length_ratio=0.601 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae RC385
GN=VCRC385_00092 PE=4 SV=1 ; EVALUE=1e-143 ;
Q/S_length_ratio=1.345"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|C2IXB5|C2IXB5_VIBCL ;
ALN/Q_length_ratio=0.601 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae TMA 21 GN=VCB_003522
PE=4 SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=1.182"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|A0A085PQ25|A0A085PQ25_VIBCL ;
ALN/Q_length_ratio=0.601 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DN41_2401 PE=4 SV=1 ; EVALUE=1e-142
; Q/S_length_ratio=1.182"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A6XZH8|A6XZH8_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae AM-19226 GN=A33_0120
PE=4 SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=1.182"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|G0A6T8|G0A6T8_METMM ;
ALN/Q_length_ratio=0.593 ; DESCRIPTION=Methyl-accepting
chemotaxis sensory transducer with Pas/Pac sensor
OS=Methylomonas methanica (strain MC09) GN=Metme_2154 PE=4
SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=1.064"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|A6A5F2|A6A5F2_VIBCL ;
ALN/Q_length_ratio=0.601 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae MZO-2 GN=A5A_0096
PE=4 SV=1 ; EVALUE=1e-142 ; Q/S_length_ratio=1.182"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A085T681|A0A085T681_VIBCL ;
ALN/Q_length_ratio=0.607 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DN30_3094 PE=4 SV=1 ; EVALUE=1e-142
; Q/S_length_ratio=1.182"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A085QL18|A0A085QL18_VIBCL ;
ALN/Q_length_ratio=0.603 ; DESCRIPTION=Sensory box protein
OS=Vibrio cholerae GN=DN33_2255 PE=4 SV=1 ; EVALUE=1e-141
; Q/S_length_ratio=1.182"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|A3EJV9|A3EJV9_VIBCL ;
ALN/Q_length_ratio=0.603 ; DESCRIPTION=Methyl-accepting
chemotaxis protein OS=Vibrio cholerae V51 GN=VCV51_0075
PE=4 SV=1 ; EVALUE=1e-141 ; Q/S_length_ratio=1.182"
/note="Pfam_scan:hit_1 (11..193);
Pfam:PF12729.2:4HB_MCP_1;
Pfam_type:Family;HMM_aln_Length:179; HMM_Length:181;
EVALUE:5.6e-25; BITSCORE: 87.7"
/note="Pfam_scan:hit_2 (200..269); Pfam:PF00672.20:HAMP;
Pfam_type:Family;HMM_aln_Length:66; HMM_Length:70;
EVALUE:8.2e-13; BITSCORE: 48.3"
/note="Pfam_scan:hit_3 (301..405); Pfam:PF13426.1:PAS_9;
Pfam_type:Domain;HMM_aln_Length:100; HMM_Length:104;
EVALUE:1.7e-14; BITSCORE: 54.0"
/note="Pfam_scan:hit_4 (520..720);
Pfam:PF00015.16:MCPsignal;
Pfam_type:Family;HMM_aln_Length:208; HMM_Length:213;
EVALUE:3e-65; BITSCORE: 219.7"
/note="GO_domain:GO:0040011"
/note="GO_domain:GO:0043234"
/note="GO_domain:GO:0016301"
/note="GO_domain:GO:0004871"
/note="Enzyme_Code:EC:2.7.3"
/note="Enzyme_Code:EC:2.7.13.3"
BEGIN
1 MSTQMATKFG NLGIGTRLIG GFLLLAVACA AVGFWGIRSM TQINQSLENA NGNLIPSLRA
61 VTDLRGSIGA VQRTERSLLV ALRAKDEATR TQAGGAMETA WAKARDAQKR YDALPMIDKE
121 KKLWNELLPR LEEFRKDHEA TIAALKTGHI EQAEKLCLAS NANALKLNGL LNDLCDLQGE
181 ISERDAKDAQ ELFASAKTTM YAVIGGAVLV AIGLGVFFRN LIVNPLNTTV KVLQAVASGD
241 LTQKATVTST DEFGQMGAAL NATVQGIHTA LQQDKVNWDV VGKQRAENAD FAGQIAAIGR
301 AQAVIEFKMD GTIASANENF LRTMGYSLSE VQGRNHSMFV EPAVTSSSEY RDFWTRLNRG
361 EYSAAEFKRV GKGGKEVWIQ GSYNPIFDLN GKPYKVVKYA TDITAAKMLE QKVKEDAAEL
421 QHKVATIVTS VTALAAGDFT QQAPDLGTDA VGQMGVALNK AIVSVRTALE GVREVSMQLA
481 DASGQLSAAS EEISTGAQEQ ASSLEETAST LEEITATVKQ NSDSAQQARQ LASGSKEVAE
541 RGGQVVSNAV DAMSEINQSS KKIADIITTI DEIAFQTNLL ALNAAVEAAR AGEQGRGFAV
601 VASEVRNLAQ RSATSAKEIK SLIEDSVKKV DAGTELVNQS GSTLGEIVTS VKRVTDIITE
661 IAAASKEQST GIDQVNKAVS QMDSVTQRNA SQTEEMSATA QTLTDQAAQL RDLVARFKLG
721 DNGQFVPRPA ARPARTKAPV TKPRPAVARA MSAGHSNGNG HAHELDRLGN GDGDGFTEF
//