LOCUS VTR94420.1 515 aa PRT BCT 03-FEB-2020
DEFINITION Gemmata massiliana rna-directed dna polymerase : Uncharacterized
protein OS=Sandaracinus amylolyticus GN=DB32_6858 PE=4
SV=1: RVT_1 protein.
ACCESSION LR593886-3721
PROTEIN_ID VTR94420.1
SOURCE Gemmata massiliana
ORGANISM Gemmata massiliana
Bacteria; Planctomycetes; Planctomycetia; Gemmatales; Gemmataceae;
Gemmata.
REFERENCE 1
AUTHORS
CONSRTM Science for Life Laboratories
JOURNAL Submitted (14-MAY-2019) to the INSDC. DEPARTMENT OF CELL AND
MOLECULAR BIOLOGY, Uppsala University, Molecular Evolution,
Biomedicinskt centrum (BMC), Husargatan 3, 752 37 Uppsala, Sweden
FEATURES Qualifiers
source /organism="Gemmata massiliana"
/chromosome="1"
/isolate="Soil9"
/mol_type="genomic DNA"
/isolation_source="soil"
/db_xref="taxon:1210884"
protein /locus_tag="SOIL9_32940"
/note="BLAST_uniprot:hit_1 ;
ACCESSION=tr|A0A085XNA2|A0A085XNA2_9DELT ;
ALN/Q_length_ratio=0.887 ; DESCRIPTION=Uncharacterized
protein OS=Sandaracinus amylolyticus GN=DB32_6858 PE=4
SV=1 ; EVALUE=1e-104 ; Q/S_length_ratio=1.068"
/note="BLAST_uniprot:hit_2 ;
ACCESSION=tr|A0A085WGI6|A0A085WGI6_9DELT ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Hyalangium minutum
GN=DB31_9013 PE=4 SV=1 ; EVALUE=1e-103 ;
Q/S_length_ratio=1.093"
/note="BLAST_uniprot:hit_3 ;
ACCESSION=tr|A0A085X9H2|A0A085X9H2_9DELT ;
ALN/Q_length_ratio=0.905 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Enhygromyxa salina
GN=DB30_4870 PE=4 SV=1 ; EVALUE=1e-103 ;
Q/S_length_ratio=1.093"
/note="BLAST_uniprot:hit_4 ;
ACCESSION=tr|L7UKW2|L7UKW2_MYXSD ;
ALN/Q_length_ratio=0.878 ; DESCRIPTION=RNA-directed DNA
polymerase domain-containing protein OS=Myxococcus
stipitatus (strain DSM 14675 / JCM 12634 / Mx s8)
GN=MYSTI_05808 PE=4 SV=1 ; EVALUE=2e-99 ;
Q/S_length_ratio=1.091"
/note="BLAST_uniprot:hit_5 ;
ACCESSION=tr|A6GJU6|A6GJU6_9DELT ;
ALN/Q_length_ratio=0.889 ; DESCRIPTION=Retron-type reverse
transcriptase OS=Plesiocystis pacifica SIR-1
GN=PPSIR1_27908 PE=4 SV=1 ; EVALUE=1e-95 ;
Q/S_length_ratio=1.038"
/note="BLAST_uniprot:hit_6 ;
ACCESSION=tr|M5S214|M5S214_9PLAN ;
ALN/Q_length_ratio=0.623 ; DESCRIPTION=RNA-directed DNA
polymerase (Reverse transcriptase) OS=Rhodopirellula
europaea SH398 GN=RESH_03803 PE=4 SV=1 ; EVALUE=2e-72 ;
Q/S_length_ratio=0.950"
/note="BLAST_uniprot:hit_7 ;
ACCESSION=tr|A0A017TBZ3|A0A017TBZ3_9DELT ;
ALN/Q_length_ratio=0.610 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Chondromyces apiculatus DSM
436 GN=CAP_1962 PE=4 SV=1 ; EVALUE=2e-69 ;
Q/S_length_ratio=0.918"
/note="BLAST_uniprot:hit_8 ;
ACCESSION=tr|W6M3S2|W6M3S2_9GAMM ;
ALN/Q_length_ratio=0.641 ; DESCRIPTION=Putative
RNA-directed DNA polymerase OS=Candidatus Competibacter
denitrificans Run_A_D11 GN=BN873_1070006 PE=4 SV=1 ;
EVALUE=6e-66 ; Q/S_length_ratio=1.187"
/note="BLAST_uniprot:hit_9 ;
ACCESSION=tr|G8T7N3|G8T7N3_NIAKG ;
ALN/Q_length_ratio=0.627 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Niastella koreensis (strain DSM 17620 / KACC
11465 / GR20-10) GN=Niako_6063 PE=4 SV=1 ; EVALUE=1e-65 ;
Q/S_length_ratio=1.026"
/note="BLAST_uniprot:hit_10 ;
ACCESSION=tr|A6GKS9|A6GKS9_9DELT ;
ALN/Q_length_ratio=0.637 ; DESCRIPTION=RNA-directed DNA
polymerase domain protein OS=Plesiocystis pacifica SIR-1
GN=PPSIR1_22406 PE=4 SV=1 ; EVALUE=9e-64 ;
Q/S_length_ratio=1.178"
/note="BLAST_uniprot:hit_11 ;
ACCESSION=tr|A0A085XZA2|A0A085XZA2_9DELT ;
ALN/Q_length_ratio=0.563 ; DESCRIPTION=Retron-type
RNA-directed DNA polymerase OS=Sandaracinus amylolyticus
GN=DB32_2367 PE=4 SV=1 ; EVALUE=2e-63 ;
Q/S_length_ratio=1.163"
/note="BLAST_uniprot:hit_12 ;
ACCESSION=tr|W4L7B2|W4L7B2_9DELT ;
ALN/Q_length_ratio=0.672 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Candidatus Entotheonella sp. TSY1
GN=ETSY1_40060 PE=4 SV=1 ; EVALUE=3e-63 ;
Q/S_length_ratio=1.103"
/note="BLAST_uniprot:hit_13 ;
ACCESSION=tr|M5T8E0|M5T8E0_9PLAN ;
ALN/Q_length_ratio=0.672 ; DESCRIPTION=RNA-directed DNA
polymerase (Reverse transcriptase) OS=Rhodopirellula sp.
SWK7 GN=RRSWK_02148 PE=4 SV=1 ; EVALUE=8e-63 ;
Q/S_length_ratio=1.198"
/note="BLAST_uniprot:hit_14 ;
ACCESSION=tr|C7PE56|C7PE56_CHIPD ;
ALN/Q_length_ratio=0.555 ; DESCRIPTION=RNA-directed DNA
polymerase OS=Chitinophaga pinensis (strain ATCC 43595 /
DSM 2588 / NCIB 11800 / UQM 2034) GN=Cpin_4096 PE=4 SV=1 ;
EVALUE=4e-62 ; Q/S_length_ratio=1.024"
/note="BLAST_uniprot:hit_15 ;
ACCESSION=tr|A0A084STE4|A0A084STE4_9DELT ;
ALN/Q_length_ratio=0.633 ; DESCRIPTION=DNA polymerase
OS=Cystobacter violaceus Cb vi76 GN=Q664_20045 PE=4 SV=1 ;
EVALUE=2e-61 ; Q/S_length_ratio=1.086"
/note="Pfam_scan:hit_1 (209..424); Pfam:PF00078.22:RVT_1;
Pfam_type:Family;HMM_aln_Length:212; HMM_Length:214;
EVALUE:1.1e-21; BITSCORE: 77.1"
/note="GO_domain:GO:0016779"
/note="GO_domain:GO:0003723"
/note="GO_domain:GO:0009058"
/note="GO_domain:GO:0006259"
/note="Enzyme_Code:EC:2.7.7.49"
BEGIN
1 MSAPRSAPAW LLLPLPANAD ADAGLIATIE QHCAKLPGTF KALHTALDRV RALASYEPAV
61 NRANELIWTQ FDALLEAPDK KARLEFVRYA REHLPERACA RVLRRLAKDA DMEVRRTVIR
121 AVRKAKIEEV AVPAQKDGDW NPTGWLLPSE ELKITRHKPG TRTQERSGVP ILTKLKDVRK
181 LLNIKSPNQL GFFLLASDHK NGPYSTHTIP KRDGTDRMIC APKKQLKWVQ KQILKHILSK
241 IPPHSAAHGF VNGRSTVSNA TPHVGAELIV KFDLKDFFPT IHYFRVMGLF ASLGYPVDNC
301 MFGTKDEAKQ VAPVLARLCC YTPDPTQWGT ATLPQGAPTS PAISNLVCRR LDARLTGLAK
361 ANKGTFTRYA DDLTFSFPKA EGLKLGRFRW WVDQLCQHEG FVVNQEKFRV IRDSQRQVVT
421 GIVVNDALRV PRELRRELRA ILHNCATHDI ESQAKRHPKF NGNVAAFTQY LRGIAAYLNM
481 VQPEHGGALL RRVNELLGGP IGDSDETPDA KAGDE
//